Network link prediction by global silencing of indirect correlations

Observability of complex systems

(2013) Y.-Y. Liu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Protein structure prediction from sequence variation

(2012) Debora S Marks et al.   NATURE BIOTECHNOLOGY

Wisdom of crowds for robust gene network inference

(2012) Daniel Marbach et al.   NATURE METHODS

Interactome Networks and Human Disease

(2011) Marc Vidal et al.   CELL

Directed Partial Correlation: Inferring Large-Scale Gene Regulatory Network through Induced Topology Disruptions

(2011) Yinyin Yuan et al.   PLoS One

The Genetic Landscape of a Cell

(2010) M. Costanzo et al.   SCIENCE

Partial Correlation Estimation by Joint Sparse Regression Models

(2009) Jie Peng et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

Quantifying the connectivity of a network: The network correlation function method

(2009) Baruch Barzel et al.   PHYSICAL REVIEW E

Studying alternative splicing regulatory networks through partial correlation analysis

(2009) Liang Chen et al.   GENOME BIOLOGY

Protein networks in disease

(2008) T. Ideker et al.   GENOME RESEARCH

A map of human protein interactions derived from co-expression of human mRNAs and their orthologs

(2008) Arun K Ramani et al.   Molecular Systems Biology

An empirical framework for binary interactome mapping

(2008) Kavitha Venkatesan et al.   NATURE METHODS

An experimentally derived confidence score for binary protein-protein interactions

(2008) Pascal Braun et al.   NATURE METHODS

Modelling and analysis of gene regulatory networks

(2008) Guy Karlebach et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

High-Quality Binary Protein Interaction Map of the Yeast Interactome Network

(2008) H. Yu et al.   SCIENCE

Uncovering Interactions in the Frequency Domain

(2008) Shuixia Guo et al.   PLoS Computational Biology

Using matrix of thresholding partial correlation coefficients to infer regulatory network

(2007) Lide Han et al.   BIOSYSTEMS