A gene ontology inferred from molecular networks

How the gene ontology evolves

(2011) Sabina Leonelli et al.   BMC BIOINFORMATICS

Resolving the structure of interactomes with hierarchical agglomerative clustering

(2011) Yongjin Park et al.   BMC BIOINFORMATICS

The National Center for Biomedical Ontology

(2011) Mark A Musen et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Saccharomyces Genome Database: the genomics resource of budding yeast

(2011) J. M. Cherry et al.   NUCLEIC ACIDS RESEARCH

Evidence for Network Evolution in an Arabidopsis Interactome Map

(2011) et al.   SCIENCE

Modularity and directionality in genetic interaction maps

(2010) A. Jaimovich et al.   BIOINFORMATICS

Using text to build semantic networks for pharmacogenomics

(2010) Adrien Coulet et al.   JOURNAL OF BIOMEDICAL INFORMATICS

YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface

(2010) D. Abdulrehman et al.   NUCLEIC ACIDS RESEARCH

The BioGRID Interaction Database: 2011 update

(2010) C. Stark et al.   NUCLEIC ACIDS RESEARCH

The Genetic Landscape of a Cell

(2010) M. Costanzo et al.   SCIENCE

Yeast Homologues of Three BLOC-1 Subunits Highlight KxDL Proteins As Conserved Interactors of BLOC-1

(2010) Matthew J. Hayes et al.   TRAFFIC

Systematic analysis of genome-wide fitness data in yeast reveals novel gene function and drug action

(2010) Maureen E Hillenmeyer et al.   GENOME BIOLOGY

The Biology of Chromatin Remodeling Complexes

(2009) Cedric R. Clapier et al.   Annual Review of Biochemistry

NuA4 and SWR1-C: two chromatin-modifying complexes with overlapping functions and componentsThis paper is one of a selection of papers published in this Special Issue, entitled 30th Annual International Asilomar Chromatin and Chromosomes Conference, and has undergone the Journal's usual peer review process.

(2009) Phoebe Y.T. Lu et al.   Biochemistry and Cell Biology

Vps-C complexes: gatekeepers of endolysosomal traffic

(2009) Daniel P Nickerson et al.   CURRENT OPINION IN CELL BIOLOGY

Telomerase, mitochondria and oxidative stress

(2009) Gabriele Saretzki   EXPERIMENTAL GERONTOLOGY

Ontology matching with semantic verification

(2009) Yves R. Jean-Mary et al.   Journal of Web Semantics

Biological Process Linkage Networks

(2009) Dikla Dotan-Cohen et al.   PLoS One

A double-hexameric MCM2-7 complex is loaded onto origin DNA during licensing of eukaryotic DNA replication

(2009) C. Evrin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Genomewide Suppressor and Enhancer Analysis of cdc13-1 Reveals Varied Cellular Processes Influencing Telomere Capping in Saccharomyces cerevisiae

(2008) S. G. Addinall et al.   GENETICS

Eaf1 Is the Platform for NuA4 Molecular Assembly That Evolutionarily Links Chromatin Acetylation to ATP-Dependent Exchange of Histone H2A Variants

(2008) A. Auger et al.   MOLECULAR AND CELLULAR BIOLOGY

Hierarchical structure and the prediction of missing links in networks

(2008) Aaron Clauset et al.   NATURE

Implementation of GenePattern within the Stanford Microarray Database

(2008) J. Hubble et al.   NUCLEIC ACIDS RESEARCH

High-Quality Binary Protein Interaction Map of the Yeast Interactome Network

(2008) H. Yu et al.   SCIENCE

An in Vivo Map of the Yeast Protein Interactome

(2008) K. Tarassov et al.   SCIENCE

A critical assessment of Mus musculus gene function prediction using integrated genomic evidence

(2008) Lourdes Peña-Castillo et al.   GENOME BIOLOGY