Attenuated sensing of SHH by Ptch1 underlies evolution of bovine limbs

Digit loss in archosaur evolution and the interplay between selection and constraints

(2013) Merijn A. G. de Bakker et al.   NATURE

The genetic causes of convergent evolution

(2013) David L. Stern   NATURE REVIEWS GENETICS

The structure and evolution ofcis-regulatory regions: theshavenbabystory

(2013) David L. Stern et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

GLI3 Constrains Digit Number by Controlling Both Progenitor Proliferation and BMP-Dependent Exit to Chondrogenesis

(2012) Javier Lopez-Rios et al.   DEVELOPMENTAL CELL

Chromatin state signatures associated with tissue-specific gene expression and enhancer activity in the embryonic limb

(2012) Justin Cotney et al.   GENOME RESEARCH

Robust 4C-seq data analysis to screen for regulatory DNA interactions

(2012) Harmen J G van de Werken et al.   NATURE METHODS

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

ENCODE Data in the UCSC Genome Browser: year 5 update

(2012) Kate R. Rosenbloom et al.   NUCLEIC ACIDS RESEARCH

Evolution of Gene Regulatory Networks Controlling Body Plan Development

(2011) Isabelle S. Peter et al.   CELL

Developmental basis of mammalian digit reduction: a case study in pigs

(2011) Karen E. Sears et al.   EVOLUTION & DEVELOPMENT

The Origin of Digits: Expression Patterns versus Regulatory Mechanisms

(2010) Joost M. Woltering et al.   DEVELOPMENTAL CELL

The evolution of the unguligrade manus in artiodactyls

(2010) Andrew B. Clifford   JOURNAL OF VERTEBRATE PALEONTOLOGY

A Systematic Enhancer Screen Using Lentivector Transgenesis Identifies Conserved and Non-Conserved Functional Elements at the Olig1 and Olig2 Locus

(2010) Marc Friedli et al.   PLoS One

Shh pathway activation is present and required within the vertebrate limb bud apical ectodermal ridge for normal autopod patterning

(2010) C. M. Bouldin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Distinct Roles of Hand2 in Initiating Polarity and Posterior Shh Expression during the Onset of Mouse Limb Bud Development

(2010) Antonella Galli et al.   PLoS Genetics

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Patched 1 is a crucial determinant of asymmetry and digit number in the vertebrate limb

(2009) N. C. Butterfield et al.   DEVELOPMENT

ABySS: A parallel assembler for short read sequence data

(2009) J. T. Simpson et al.   GENOME RESEARCH

Vertebrate limb bud development: moving towards integrative analysis of organogenesis

(2009) Rolf Zeller et al.   NATURE REVIEWS GENETICS

Relationships of Cetacea (Artiodactyla) Among Mammals: Increased Taxon Sampling Alters Interpretations of Key Fossils and Character Evolution

(2009) Michelle Spaulding et al.   PLoS One

A Self-Regulatory System of Interlinked Signaling Feedback Loops Controls Mouse Limb Patterning

(2009) J.-D. Benazet et al.   SCIENCE

Adaptive Evolution of Pelvic Reduction in Sticklebacks by Recurrent Deletion of a Pitx1 Enhancer

(2009) Y. F. Chan et al.   SCIENCE

Profiles of Gonadal Gene Expression in the Developing Bovine Embryo

(2009) D.G.F. Ross et al.   Sexual Development

Evo-Devo and an Expanding Evolutionary Synthesis: A Genetic Theory of Morphological Evolution

(2008) Sean B. Carroll   CELL

Uncoupling Sonic Hedgehog Control of Pattern and Expansion of the Developing Limb Bud

(2008) Jianjian Zhu et al.   DEVELOPMENTAL CELL

Regulatory divergence modifies limb length between mammals

(2008) C. J. Cretekos et al.   GENES & DEVELOPMENT

A genome-scale analysis of the cis-regulatory circuitry underlying sonic hedgehog-mediated patterning of the mammalian limb

(2008) S. A. Vokes et al.   GENES & DEVELOPMENT

Genetic evidence that FGFs have an instructive role in limb proximal–distal patterning

(2008) Francesca V. Mariani et al.   NATURE

Domestication and early agriculture in the Mediterranean Basin: Origins, diffusion, and impact

(2008) M. A. Zeder   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA