Article
Multidisciplinary Sciences
Evangelos Vlachos
Summary: By transforming a complex text into a network, this study further explores the structure of the International Code of Zoological Nomenclature and identifies different conceptual communities. Results show that the current structure of the Code aligns well with recovered conceptual modules in most chapters, but conflicts exist in certain chapters. Potential re-organization of the Code could improve reader experience and applicability.
Article
Plant Sciences
Kevin R. Thiele, Gideon F. Smith, Estrela Figueiredo, Timothy A. Hammer
Summary: This paper points out the misinterpretation of the intent and mechanism of the proposals to amend the Code and suggests that adopting these proposals can contribute to addressing historical wrongs.
Article
Microbiology
Adyasha Panda, Salim T. Islam, Gaurav Sharma
Summary: In this article, Lloyd and Tahon criticize the proposed changes in bacterial phylum nomenclature and highlight several pitfalls of the new framework. They suggest new names for key bacterial phyla while keeping the archaeal phylum names. These changes aim to achieve a consistent and chaos-free nomenclature for researchers.
Article
Microbiology
Adyasha Panda, Salim T. Islam, Gaurav Sharma
Summary: This article criticizes the proposed changes in bacterial phylum nomenclature by the International Committee on Systematics of Prokaryotes and discusses the potential problems and suggestions for improvement.
Article
Mycology
Gargee Singh, Sanjay Yadav, Raghvendra Singh, Shambhu Kumar
Summary: Based on critical re-examinations of original type material and comparison with closely related species, the hyphomycete Cercospora golaghati is recombined as Passalora golaghati.
Review
Microbiology
Erik Munson, Karen C. Carroll
Summary: Understanding novel prokaryotic taxon discovery and nomenclature revisions is crucial for clinical microbiology laboratory practice, infectious disease epidemiology, and microbial pathogenesis studies. Recent summaries of taxonomic designations and revisions have included changes in several bacterial genera, highlighting the need for further efforts to determine their clinical relevance and support.
JOURNAL OF CLINICAL MICROBIOLOGY
(2021)
Editorial Material
Microbiology
Sybren de Hoog, Thomas J. Walsh, Sarah A. Ahmed, Ana Alastruey-Izquierdo, Barbara D. Alexander, Maiken Cavling Arendrup, Esther Babady, Feng-Yan Bai, Joan-Miquel Balada-Llasat, Andrew Borman, Anuradha Chowdhary, Andrew Clark, Robert C. Colgrove, Oliver A. Cornely, Tanis C. Dingle, Philippe J. Dufresne, Jeff Fuller, Jean-Pierre Gangneux, Connie Gibas, Heather Glasgow, Yvonne Graeser, Jacques Guillot, Andreas H. Groll, Gerhard Haase, Kimberly Hanson, Amanda Harrington, David L. Hawksworth, Randall T. Hayden, Martin Hoenigl, Vit Hubka, Kristie Johnson, Julianne V. Kus, Ruoyu Li, Jacques F. Meis, Michaela Lackner, Fanny Lanternier, Sixto M. Leal Jr, Francesca Lee, Shawn R. Lockhart, Paul Luethy, Isabella Martin, Kyung J. Kwon-Chung, Wieland Meyer, M. Hong Nguyen, Luis Ostrosky-Zeichner, Elizabeth Palavecino, Preeti Pancholi, Peter G. Pappas, Gary W. Procop, Scott A. Redhead, Daniel D. Rhoads, Stefan Riedel, Bryan Stevens, Kaede Ota Sullivan, Paschalis Vergidis, Emmanuel Roilides, Amir Seyedmousavi, Lili Tao, Vania A. Vicente, Roxana G. Vitale, Qi-Ming Wang, Nancy L. Wengenack, Lars Westblade, Nathan Wiederhold, Lewis White, Christina M. Wojewoda, Sean X. Zhang
Summary: The rapid pace of name changes of medically important fungi creates challenges for clinical laboratories and clinicians. Suggestions are made to reduce the number of name changes and provide diagnostic markers. It is recommended to maintain stability at the genus level and report both overarching species and molecular siblings. An open access online database of all medically important fungi names is essential, and new name changes should be reviewed routinely by a standing committee.
JOURNAL OF CLINICAL MICROBIOLOGY
(2023)
Article
Plant Sciences
Sergei L. Mosyakin
Summary: This article discusses proposed changes to the International Code of Nomenclature of algae, fungi, and plants (ICN) aimed at rejecting and replacing names that are considered culturally offensive or inappropriate. The article calls upon the international taxonomic community to reject these proposals and protect scientific freedom, nomenclatural stability, and political neutrality.
Article
Virology
Peter J. Walker, Stuart G. Siddell, Elliot J. Lefkowitz, Arcady R. Mushegian, Evelien M. Adriaenssens, Poliane Alfenas-Zerbini, Andrew J. Davison, Donald M. Dempsey, Bas E. Dutilh, Maria Laura Garcia, Balazs Harrach, Robert L. Harrison, R. Curtis Hendrickson, Sandra Junglen, Nick J. Knowles, Mart Krupovic, Jens H. Kuhn, Amy J. Lambert, Malgorzata Lobocka, Max L. Nibert, Hanna M. Oksanen, Richard J. Orton, David L. Robertson, Luisa Rubino, Sead Sabanadzovic, Peter Simmonds, Donald B. Smith, Nobuhiro Suzuki, Koenraad Van Dooerslaer, Anne-Mieke Vandamme, Arvind Varsani, Francisco Murilo Zerbini
Summary: This article reports the changes to virus taxonomy approved and ratified by ICTV in March 2021. All proposals and revisions were passed by an absolute majority of ICTV members. ICTV mandated a new uniform rule for virus species naming, abolished the notion of a type species, and clarified its remit through an official definition of 'virus' and other types of mobile genetic elements.
ARCHIVES OF VIROLOGY
(2021)
Article
Zoology
Rudiger Bieler
Summary: American conchologist Isaac Lea introduced over 1,800 names of molluscan species between 1827 and 1874, but faced challenges in determining accurate dates of his original descriptions due to his idiosyncratic publishing methods. His frequent modifications to his taxonomic names in subsequent publications without clear justification added to the difficulty of interpreting his work. The study analyzed Lea's name substitutions and modifications, covering 231 species introduced by him, and discussed issues related to precise dating and classification under the ICZN Code.
Article
Plant Sciences
Yu Wan, De-Wei Li, Yuan-Zhi Si, Min Li, Lin Huang, Li-Hua Zhu
Summary: In this study, three new species of Diaporthe on Acer palmatum were described and their phylogenetic relationships were determined. The tests of Koch's postulates confirmed that these three new species were pathogens causing leaf blight on A. palmatum. This study provides important information on the morphology and phylogenetic relationships of Diaporthe spp.
Review
Microbiology
Sara D. Lawhon, Claire R. Burbick, Erik Munson, Elizabeth Thelen, Amanda Zapp, Anastasia Wilson
Summary: The study describes the discovery of new taxa in the microbial world of domestic animals in 2022 and discusses the implications of these changes. The newly discovered species include Moraxella nasovis, which causes respiratory disease in sheep, novel members of Campylobacteraceae associated with spotty liver disease in chickens, and diverse organisms from the microbiota of dogs, pigs, honeybees, and other important pollinators. The findings also highlight the presence of diseases in cattle, such as mastitis, endocarditis, orchitis, and endometritis, as well as the identification of a new species, Pseudochrobactrum algeriense, isolated from the mammary lymph nodes of cows.
JOURNAL OF CLINICAL MICROBIOLOGY
(2023)
Article
Plant Sciences
Sergei L. Mosyakin
Summary: Smith and Figueiredo's recent articles discuss the important issue of removing colonial legacy in botanical nomenclature and address politically motivated proposals. The article points out that some historical figures associated with taxa names have been criticized for their racist or colonialist actions, and discusses the issue of offensive or inappropriate names. The article emphasizes that science should not employ politically motivated censorship to erase history and nomenclatural traditions.
Article
Plant Sciences
Giulio Barone, Gianniantonio Domina, Fabrizio Bartolucci, Gabriele Galasso, Lorenzo Peruzzi
Summary: Senecio squalidus, a plant species of the Asteraceae family, consists of nine subspecies. A comprehensive study was conducted to examine the nomenclatural types of this taxonomic group, resulting in the designation of 14 lectotypes. Field investigations and nomenclatural analysis led to the acceptance of 10 species and the proposal of two new names.
Article
Plant Sciences
Sergei L. Mosyakin
Summary: The proposals by Wright and Gillman to amend the International Code of Nomenclature for algae, fungi, and plants (ICN) by allowing the retroactive replacement of scientific names with indigenous names have been met with criticism. Their definition of Indigenous People is different from internationally recognized definitions, and their arguments regarding chronological priority and the use of indigenous diacritics have been deemed irrelevant and impractical. The proposals have also been criticized for being potentially discriminatory and biased. Consequently, the international taxonomic community should reject these proposals.