Accurate measurements of dynamics and reproducibility in small genetic networks

Efficient Reverse-Engineering of a Developmental Gene Regulatory Network

(2012) Anton Crombach et al.   PLoS Computational Biology

Measurement and Perturbation of Morphogen Lifetime: Effects on Gradient Shape

(2011) Jeffrey A. Drocco et al.   BIOPHYSICAL JOURNAL

Pattern, Growth, and Control

(2011) Arthur D. Lander   CELL

The Drosophila Gap Gene Network Is Composed of Two Parallel Toggle Switches

(2011) Dmitri Papatsenko et al.   PLoS One

The Formation of the Bicoid Morphogen Gradient Requires Protein Movement from Anteriorly Localized mRNA

(2011) Shawn C. Little et al.   PLOS BIOLOGY

Consequences of Eukaryotic Enhancer Architecture for Gene Expression Dynamics, Development, and Fitness

(2011) Michael Z. Ludwig et al.   PLoS Genetics

The gap gene network

(2010) Johannes Jaeger   CELLULAR AND MOLECULAR LIFE SCIENCES

Deciphering a transcriptional regulatory code: modeling short-range repression in the Drosophila embryo

(2010) Walid D Fakhouri et al.   Molecular Systems Biology

Precision and scaling in morphogen gradient read-out

(2010) Aitana Morton de Lachapelle et al.   Molecular Systems Biology

Stripe formation in the early fly embryo: principles, models, and networks

(2009) Dmitri Papatsenko   BIOESSAYS

Blind Source Separation Techniques for the Decomposition of Multiply Labeled Fluorescence Images

(2009) Richard A. Neher et al.   BIOPHYSICAL JOURNAL

Optimizing information flow in small genetic networks

(2009) Gašper Tkačik et al.   PHYSICAL REVIEW E

Role of Spatial Averaging in the Precision of Gene Expression Patterns

(2009) Thorsten Erdmann et al.   PHYSICAL REVIEW LETTERS

Anterior-posterior positional information in the absence of a strong Bicoid gradient

(2009) A. Ochoa-Espinosa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

In situ Visualization of Gene Expression Using Polymer-Coated Quantum-Dot-DNA Conjugates

(2009) Youngseon Choi et al.   Small

Canalization of Gene Expression in the Drosophila Blastoderm by Gap Gene Cross Regulation

(2009) Manu et al.   PLOS BIOLOGY

Canalization of Gene Expression and Domain Shifts in the Drosophila Blastoderm by Dynamical Attractors

(2009) Manu et al.   PLoS Computational Biology

Estimation of errors introduced by confocal imaging into the data on segmentation gene expression in Drosophila

(2008) Ekaterina Myasnikova et al.   BIOINFORMATICS

A Quantitative Spatiotemporal Atlas of Gene Expression in the Drosophila Blastoderm

(2008) Charless C. Fowlkes et al.   CELL

Probing Intrinsic Properties of a Robust Morphogen Gradient in Drosophila

(2008) Feng He et al.   DEVELOPMENTAL CELL

FlyEx, the quantitative atlas on segmentation gene expression at cellular resolution

(2008) A. Pisarev et al.   NUCLEIC ACIDS RESEARCH

Information flow and optimization in transcriptional regulation

(2008) G. Tkacik et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Image Processing and Analysis for Quantifying Gene Expression from Early Drosophila Embryos

(2008) Ahmet Ay et al.   TISSUE ENGINEERING PART A

Characterization of the Drosophila segment determination morphome

(2007) Svetlana Surkova et al.   DEVELOPMENTAL BIOLOGY