Cross-talk between phosphorylation and lysine acetylation in a genome-reduced bacterium

Eukaryotic-like Ser/Thr Protein Kinases SpkC/F/K Are Involved in Phosphorylation of GroES in the Cyanobacterium Synechocystis

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SUMOylation-regulated Protein Phosphorylation, Evidence from Quantitative Phosphoproteomics Analyses

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Quantification of mRNA and protein and integration with protein turnover in a bacterium

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Crystal Structure of the Maltose Transporter in a Pretranslocation Intermediate State

(2011) M. L. Oldham et al.   SCIENCE

System-Wide Temporal Characterization of the Proteome and Phosphoproteome of Human Embryonic Stem Cell Differentiation

(2011) K. T. G. Rigbolt et al.   Science Signaling

A Tissue-Specific Atlas of Mouse Protein Phosphorylation and Expression

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Strong cation exchange (SCX) based analytical methods for the targeted analysis of protein post-translational modifications

(2010) Shabaz Mohammed et al.   CURRENT OPINION IN BIOTECHNOLOGY

Value of Using Multiple Proteases for Large-Scale Mass Spectrometry-Based Proteomics

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RockerBox: Analysis and Filtering of Massive Proteomics Search Results

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The Phosphoproteome of the Minimal BacteriumMycoplasma pneumoniae

(2010) Sebastian R. Schmidl et al.   MOLECULAR & CELLULAR PROTEOMICS

Bacterial protein acetylation: the dawning of a new age

(2010) Linda I. Hu et al.   MOLECULAR MICROBIOLOGY

Post-translational modifications in signal integration

(2010) Yonathan Lissanu Deribe et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Phospho.ELM: a database of phosphorylation sites--update 2011

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PHOSIDA 2011: the posttranslational modification database

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Ongoing and future developments at the Universal Protein Resource

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Extensive phosphorylation with overlapping specificity by Mycobacterium tuberculosis serine/threonine protein kinases

(2010) S. Prisic et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Acetylation of Metabolic Enzymes Coordinates Carbon Source Utilization and Metabolic Flux

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Regulation of Cellular Metabolism by Protein Lysine Acetylation

(2010) S. Zhao et al.   SCIENCE

Phosphoproteomic Analysis Reveals Interconnected System-Wide Responses to Perturbations of Kinases and Phosphatases in Yeast

(2010) B. Bodenmiller et al.   Science Signaling

Phosphorylation Dynamics during Early Differentiation of Human Embryonic Stem Cells

(2009) Dennis Van Hoof et al.   Cell Stem Cell

The Stability of Cytadherence Proteins in Mycoplasma pneumoniae Requires Activity of the Protein Kinase PrkC

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MSQuant, an Open Source Platform for Mass Spectrometry-Based Quantitative Proteomics

(2009) Peter Mortensen et al.   JOURNAL OF PROTEOME RESEARCH

SysPTM: A Systematic Resource for Proteomic Research on Post-translational Modifications

(2009) Hong Li et al.   MOLECULAR & CELLULAR PROTEOMICS

Multiplex peptide stable isotope dimethyl labeling for quantitative proteomics

(2009) Paul J Boersema et al.   Nature Protocols

eggNOG v2.0: extending the evolutionary genealogy of genes with enhanced non-supervised orthologous groups, species and functional annotations

(2009) J. Muller et al.   NUCLEIC ACIDS RESEARCH

Proteome Organization in a Genome-Reduced Bacterium

(2009) S. Kuhner et al.   SCIENCE

Impact of Genome Reduction on Bacterial Metabolism and Its Regulation

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Lysine Acetylation Targets Protein Complexes and Co-Regulates Major Cellular Functions

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Transcriptome Complexity in a Genome-Reduced Bacterium

(2009) M. Guell et al.   SCIENCE

OutlierD: an R package for outlier detection using quantile regression on mass spectrometry data

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Lysine Acetylation Is a Highly Abundant and Evolutionarily Conserved Modification inEscherichia Coli

(2008) Junmei Zhang et al.   MOLECULAR & CELLULAR PROTEOMICS

Lysine Acetylation: Codified Crosstalk with Other Posttranslational Modifications

(2008) Xiang-Jiao Yang et al.   MOLECULAR CELL

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

The Rpd3/Hda1 family of lysine deacetylases: from bacteria and yeast to mice and men

(2008) Xiang-Jiao Yang et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

MODBASE, a database of annotated comparative protein structure models and associated resources

(2008) U. Pieper et al.   NUCLEIC ACIDS RESEARCH

STRING 8--a global view on proteins and their functional interactions in 630 organisms

(2008) L. J. Jensen et al.   NUCLEIC ACIDS RESEARCH

Deacetylation of cortactin by SIRT1 promotes cell migration

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The Ser/Thr/Tyr phosphoproteome of Lactococcus lactis IL1403 reveals multiply phosphorylated proteins

(2008) Boumediene Soufi et al.   PROTEOMICS