Solving the equations of motion for mixed atomistic and coarse-grained systems

Simulation approaches to soft matter: Generic statistical properties vs. chemical details

(2008) Matej Praprotnik et al.   COMPUTER PHYSICS COMMUNICATIONS

Conservative Algorithm for an Adaptive Change of Resolution in Mixed Atomistic/Coarse-Grained Multiscale Simulations

(2008) Andreas Heyden et al.   Journal of Chemical Theory and Computation

Topologically Based Multipolar Reconstruction of Electrostatic Interactions in Multiscale Simulations of Proteins

(2008) Michele Cascella et al.   Journal of Chemical Theory and Computation

The MARTINI Coarse-Grained Force Field: Extension to Proteins

(2008) Luca Monticelli et al.   Journal of Chemical Theory and Computation

Multiscale Simulation of Soft Matter: From Scale Bridging to Adaptive Resolution

(2007) Matej Praprotnik et al.   Annual Review of Physical Chemistry

Microseconds Dynamics Simulations of the Outer-Membrane Protease T

(2007) Marilisa Neri et al.   BIOPHYSICAL JOURNAL

Transport properties controlled by a thermostat: An extended dissipative particle dynamics thermostat

(2007) Christoph Junghans et al.   Soft Matter