4.7 Article

Analysis of three Xanthomonas axonopodis pv. citri effector proteins in pathogenicity and their interactions with host plant proteins

Journal

MOLECULAR PLANT PATHOLOGY
Volume 13, Issue 8, Pages 865-876

Publisher

WILEY-BLACKWELL
DOI: 10.1111/j.1364-3703.2012.00797.x

Keywords

-

Categories

Funding

  1. Argentine Federal Government (ANPCyT) [PICT2010-1507, PICT2010-0300]
  2. Fundacion Josefina Prats
  3. Fundacao de Amparo a Pesquisa do Estado de Sao Paulo [2005/59243-3]

Ask authors/readers for more resources

Xanthomonas axonopodis pv. citri, the bacterium responsible for citrus canker, uses effector proteins secreted by a type III protein secretion system to colonize its hosts. Among the putative effector proteins identified for this bacterium, we focused on the analysis of the roles of AvrXacE1, AvrXacE2 and Xac3090 in pathogenicity and their interactions with host plant proteins. Bacterial deletion mutants in avrXacE1, avrXacE2 and xac3090 were constructed and evaluated in pathogenicity assays. The avrXacE1 and avrXacE2 mutants presented lesions with larger necrotic areas relative to the wild-type strain when infiltrated in citrus leaves. Yeast two-hybrid studies were used to identify several plant proteins likely to interact with AvrXacE1, AvrXacE2 and Xac3090. We also assessed the localization of these effector proteins fused to green fluorescent protein in the plant cell, and observed that they co-localized to the subcellular spaces in which the plant proteins with which they interacted were predicted to be confined. Our results suggest that, although AvrXacE1 localizes to the plant cell nucleus, where it interacts with transcription factors and DNA-binding proteins, AvrXacE2 appears to be involved in lesion-stimulating disease 1-mediated cell death, and Xac3090 is directed to the chloroplast where its function remains to be clarified.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.7
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Microbiology

The Xanthomonas citri pv. citri Type VI Secretion System is Induced During Epiphytic Colonization of Citrus

Lucas M. Ceseti, Eliane S. de Santana, Camila Y. Ratagami, Yasmin Barreiros, Lidia Dos Passos Lima, German Dunger, Chuck S. Farah, Cristina E. Alvarez-Martinez

CURRENT MICROBIOLOGY (2019)

Article Chemistry, Physical

Substrate and Product-Assisted Catalysis: Molecular Aspects behind Structural Switches along Organic Hydroperoxide Resistance Protein Catalytic Cycle

Renato M. Domingos, Raphael D. Teixeira, Ari Zeida, William A. Agudelo, Thiago G. P. Alegria, Jose F. da Silva Neto, Plinio S. Vieira, Mario T. Murakami, Chuck S. Farah, Dario A. Estrin, Luis E. S. Netto

ACS CATALYSIS (2020)

Article Microbiology

Bactericidal type IV secretion system homeostasis in Xanthomonas citri

William Cenens, Maxuel O. Andrade, Edgar Llontop, Cristina E. Alvarez-Martinez, German G. Sgro, Chuck S. Farah

PLOS PATHOGENS (2020)

Article Chemistry, Physical

Molecular Dynamics Reveals Complex Compensatory Effects of Ionic Strength on the Severe Acute Respiratory Syndrome Coronavirus 2 Spike/Human Angiotensin-Converting Enzyme 2 Interaction

Anacleto Silva de Souza, Jose David Rivera, Vitor Medeiros Almeida, Pingju Ge, Robson Francisco de Souza, Chuck Shaker Farah, Henning Ulrich, Sandro Roberto Marana, Roberto Kopke Salinas, Cristiane Rodrigues Guzzo

JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2020)

Article Microbiology

The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri

Edgar E. Llontop, William Cenens, Denize C. Favaro, German G. Sgro, Roberto K. Salinas, Cristiane R. Guzzo, Chuck S. Farah

Summary: The study reveals that in Xanthomonas citri, the ATPase PilB can form a complex with two regulatory proteins, PilZ and c-di-GMP receptor FimX, and these proteins colocalize at the leading poles of the bacterial cells during surface motility. The X-ray structures of PilZ in complex with PilB's N-terminal domain and FimX's C-terminal domain allow for a proposed model of the three-way interaction between these proteins.

PLOS PATHOGENS (2021)

Article Medicine, General & Internal

A Novel Saliva RT-LAMP Workflow for Rapid Identification of COVID-19 Cases and Restraining Viral Spread

Gerson Shigeru Kobayashi, Luciano Abreu Brito, Danielle de Paula Moreira, Angela May Suzuki, Gabriella Shih Ping Hsia, Lylyan Fragoso Pimentel, Ana Paula Barreto de Paiva, Carolina Regoli Dias, Naila Cristina Vilaca Lourenco, Beatriz Araujo Oliveira, Erika Regina Manuli, Marcelo Andreetta Corral, Natale Cavacana, Miguel Mitne-Neto, Maria Mirtes Sales, Luiz Phellipe Dell' Aquila, Alvaro Razuk Filho, Eduardo Fagundes Parrillo, Maria Cassia Mendes-Correa, Ester Cerdeira Sabino, Silvia Figueiredo Costa, Fabio Eudes Leal, German Gustavo Sgro, Chuck Shaker Farah, Mayana Zatz, Maria Rita Passos-Bueno

Summary: The study developed a direct RT-LAMP workflow for viral detection in saliva, showing high sensitivity and specificity. Salivary viral load peaks in the first days of symptoms and then decreases. The findings suggest that saliva reflects transmission dynamics better than NOP specimens, and gender differences in viral load may affect transmission rates.

DIAGNOSTICS (2021)

Article Multidisciplinary Sciences

Structural basis for effector recognition by an antibacterial type IV secretion system

Gabriel U. Oka, Diorge P. Souza, William Cenens, Bruno Y. Matsuyama, Marcus V. C. Cardoso, Luciana C. Oliveira, Filipe da Silva Lima, Iolanda M. Cuccovia, Cristiane R. Guzzo, Roberto K. Salinas, Chuck S. Farah

Summary: The study identified an interaction between XVIPCD and VirD4, dividing XVIPCD into two regions with distinct functions. The N-terminal region interacts with VirD4, while both the N- and C-terminal regions are required for efficient X-Tfe translocation into target cells. The conformational stability of the N-terminal region is reduced at lower pH, potentially facilitating X-Tfe unfolding and translocation.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2022)

Article Microbiology

An Extracytoplasmic Function Sigma Factor Required for Full Virulence in Xanthomonas citri pv. citri

Lidia dos Passos Lima, Juliana Biar Pereira, Anthony Jhoao Fasabi Flores, Alan Pericles Rodrigues Lorenzetti, Ana Laura Boechat, Maria Claudia Pereda, Sophia Gualtieri, Daniele Ferreira do Prado, Diego Rocha, Lucas de Moraes Ceseti, Regina Lucia Baldini, Chuck S. Farah, Tie Koide, Celso Eduardo Benedetti, Cristina E. Alvarez-Martinez

Summary: The genus Xanthomonas includes multiple phytopathogenic species that infect various plants and cause significant crop diseases. This study characterizes a sigma(ECF) factor called EcfL in Xanthomonas citri, showing its involvement in the virulence and adaptation of the bacterium to citrus plants. EcfL regulates an operon containing three genes and is induced in response to acid stress.

JOURNAL OF BACTERIOLOGY (2022)

Article Environmental Sciences

Toxicity of spike fragments SARS-CoV-2 S protein for zebrafish: A tool to study its hazardous for human health?

Bianca H. Ventura Fernandes, Natalia Martins Feitosa, Ana Paula Barbosa, Camila Gasque Bomfim, Anali M. B. Garnique, Ivana F. Rosa, Maira S. Rodrigues, Lucas B. Doretto, Daniel F. Costa, Bruno Camargo-dos-Santos, Gabrielli A. Franco, Joao Favero Neto, Juliana Sartori Lunardi, Marina Sanson Bellot, Nina Pacheco Capelini Alves, Camila C. Costa, Mayumi F. Aracati, Leticia F. Rodrigues, Rafaela Hemily Cirilo, Raul Marcelino Colagrande, Francisco I. F. Gomes, Rafael T. Nakajima, Marco A. A. Belo, Percilia Cardoso Giaquinto, Susana Luporini de Oliveira, Silas Fernandes Eto, Dayanne Carla Fernandes, Wilson G. Manrique, Gabriel Conde, Roberta R. C. Rosales, Iris Todeschini, Ilo Rivero, Edgar Llontop, German G. Sgro, Gabriel Umaji Oka, Natalia Fernanda Bueno, Fausto K. Ferraris, Mariana T. Q. de Magalhaes, Renata J. Medeiros, Juliana M. Mendonca-Gomes, Mara Souza Junqueira, Katia Conceicao, Leticia Gomes de Pontes, Antonio Condino-Neto, Andrea C. Perez, Leonardo J. G. Barcellos, Jose Dias Correa Junior, Erick Gustavo Dorlass, Niels O. S. Camara, Edison Luiz Durigon, Fernando Q. Cunha, Rafael H. Nobrega, Glaucia M. Machado-Santelli, Chuck S. Farah, Flavio P. Veras, Jorge Galindo-Villegas, Leticia Costa-Lotufo, Thiago M. Cunha, Roger Chammas, Luciani R. Carvalho, Cristiane R. Guzzo, Guilherme Malafaia, Ives Charlie-Silva

Summary: This study found that injection of SARS-CoV-2 Spike protein rSpike in zebrafish resulted in mortality and adverse effects on liver, kidney, ovary, and brain tissues, with a survival rate of 78.6%. The conserved genetic homology between zebrafish and humans may contribute to the intense toxic effects observed. The results highlight the potential of zebrafish as an animal model for translational COVID-19 research and for understanding ecotoxicological impacts, vaccine responses, and therapeutic approaches.

SCIENCE OF THE TOTAL ENVIRONMENT (2022)

Article Biotechnology & Applied Microbiology

Genomic Characterization of Bacillus safensis Isolated from Mine Tailings in Peru and Evaluation of Its Cyanide-Degrading Enzyme CynD

Santiago Justo Arevalo, Daniela Zapata Sifuentes, Andrea Cuba Portocarrero, Michella Brescia Reategui, Claudia Monge Pimentel, Layla Farage Martins, Paulo Marques Pierry, Carlos Morais Piroupo, Alcides Guerra Santa Cruz, Mauro Quinones Aguilar, Chuck Shaker Farah, Joao Carlos Setubal, Aline Maria da Silva

Summary: Understanding the biochemistry and metabolic pathways of cyanide degradation is crucial for improving cyanide bioremediation processes. In this study, a cyanide-degrading Bacillus strain was isolated and sequenced from water in contact with mine tailings in Peru. The genome analysis identified a putative cyanide dihydratase gene, and the recombinant enzyme showed activity at high pH. Transcription of the gene was strongly induced in the presence of cyanide. These findings suggest that this Bacillus strain and its cyanide dihydratase enzyme could be potential tools for cyanide bioremediation.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2022)

Article Biotechnology & Applied Microbiology

Human growth hormone inclusion bodies present native-like secondary and tertiary structures which can be preserved by mild solubilization for refolding

Rosa Maria Chura-Chambi, Chuck Shaker Farah, Ligia Morganti

Summary: We have demonstrated that hGH-IBs possess native-like secondary and tertiary structures and that non-denaturing methods can lead to high yields of refolded protein. The refolding process described in this study is likely applicable to other proteins, and it may be particularly useful for reducing the pH required for alkaline solubilization.

MICROBIAL CELL FACTORIES (2022)

Article Biochemistry & Molecular Biology

The AraC-type transcription factor TagK is a new player in the signaling cascade that induces the anti-eukaryotic T6SS of Xanthomonas citri

Lidia dos Passos Lima, Eliane Silva de Santana, Alan Pericles Rodrigues Lorenzetti, Rogerio Ferreira Lourenco, Lucas de Moraes Ceseti, Luana Riva, Ethel Bayer-Santos, Ana Laura Boechat, Regina Lucia Baldini, Chuck Shaker Farah, Tie Koide, Cristina Elisa Alvarez-Martinez

Summary: This study uncovers the regulatory mechanism of X. citri T6SS. Overexpression of a constitutively active EcfK activates the transcription factor TagK, which induces the expression of T6SS genes. TagK binds directly to T6SS gene promoters and promotes T6SS expression upon contact with amoeba cells.

MOLECULAR MICROBIOLOGY (2022)

Article Biology

Antibacterial T6SS effectors with a VRR-Nuc domain are structure-specific nucleases

Julia Takuno Hespanhol, Daniel Enrique Sanchez-Limache, Gianlucca Goncalves Nicastro, Liam Mead, Edgar Enrique Llontop, Gustavo Chagas-Santos, Chuck Shaker Farah, Robson Francisco de Souza, Rodrigo da Silva Galhardo, Andrew L. Lovering, Ethel Bayer-Santos

Summary: This study characterizes the function of the SPI-22 T6SS in Salmonella bongori, highlighting its antibacterial activity, and identifies a group of antibacterial T6SS effectors (TseV1-4) evolutionarily related to DNA repair enzymes. Specifically, TseV3 is able to recognize and cleave specific DNA structures, generating DNA double-strand breaks and inducing the SOS response in target cells. The crystal structure of the TseV3:TsiV3 complex suggests that the immunity protein blocks the effector's interaction with the DNA substrate.

ELIFE (2022)

Review Biochemistry & Molecular Biology

Secrete or perish: The role of secretion systems in Xanthomonas biology

Cristina E. Alvarez-Martinez, German G. Sgro, Gabriel G. Araujo, Mateus R. N. Paiva, Bruno Y. Matsuyama, Cristiane R. Guzzo, Maxuel O. Andrade, Chuck S. Farah

Summary: This study describes the diversity of roles played by different types of secretion systems in adaptation and virulence in Xanthomonas, as well as the distribution and functions associated with these important nanoweapons within the genus.

COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL (2021)

No Data Available