Application of high-throughput genome sequencing to intrapathovar variation in Pseudomonas syringae

Next-generation genomics of Pseudomonas syringae

(2011) Heath E. O’Brien et al.   CURRENT OPINION IN MICROBIOLOGY

Genome Sequence Analyses of Pseudomonas savastanoi pv. glycinea and Subtractive Hybridization-Based Comparative Genomics with Nine Pseudomonads

(2011) Mingsheng Qi et al.   PLoS One

Rapid Pneumococcal Evolution in Response to Clinical Interventions

(2011) N. J. Croucher et al.   SCIENCE

Navigating the future of bacterial molecular epidemiology

(2010) Stephen Baker et al.   CURRENT OPINION IN MICROBIOLOGY

Transcriptome Analysis of Pseudomonas syringae Identifies New Genes, Noncoding RNAs, and Antisense Activity

(2010) M. J. Filiatrault et al.   JOURNAL OF BACTERIOLOGY

The case for the defense: plants versus Pseudomonas syringae

(2010) Selena Gimenez-Ibanez et al.   MICROBES AND INFECTION

Pseudomonas syringaeStrains Naturally Lacking the ClassicalP. syringae hrp/hrcLocus Are Common Leaf Colonizers Equipped with an Atypical Type III Secretion System

(2010) Christopher R. Clarke et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Comparative Genome Analysis Provides Insights into the Evolution and Adaptation of Pseudomonas syringae pv. aesculi on Aesculus hippocastanum

(2010) Sarah Green et al.   PLoS One

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

A draft genome sequence and functional screen reveals the repertoire of type III secreted proteins of Pseudomonas syringae pathovar tabaci 11528

(2009) David J Studholme et al.   BMC GENOMICS

Bacterial Evolution by Genomic Island Transfer Occurs via DNA Transformation In Planta

(2009) Helen C. Lovell et al.   CURRENT BIOLOGY

Pseudomonas syringae type III secretion system effectors: repertoires in search of functions

(2009) Sébastien Cunnac et al.   CURRENT OPINION IN MICROBIOLOGY

From bacterial avirulence genes to effector functions via thehrpdelivery system: an overview of 25 years of progress in our understanding of plant innate immunity

(2009) JOHN W. MANSFIELD   MOLECULAR PLANT PATHOLOGY

Infection of horse chestnut (Aesculus hippocastanum) byPseudomonas syringaepv.aesculiand its detection by quantitative real-time PCR

(2009) S. Green et al.   PLANT PATHOLOGY

Genomes as documents of evolutionary history

(2009) Bastien Boussau et al.   TRENDS IN ECOLOGY & EVOLUTION

Toward the Use of Genomics to Study Microevolutionary Change in Bacteria

(2009) Daniel Falush   PLoS Genetics

Evolutionary patterns in prokaryotic genomes

(2008) Eduardo PC Rocha   CURRENT OPINION IN MICROBIOLOGY

De novoassembly of thePseudomonas syringaepv.syringaeB728a genome using Illumina/Solexa short sequence reads

(2008) Rhys A. Farrer et al.   FEMS MICROBIOLOGY LETTERS

Pseudomonas syringae pv. aesculi associated with horse chestnut bleeding canker in Germany

(2008) O. Schmidt et al.   FOREST PATHOLOGY

De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae

(2008) J. A. Reinhardt et al.   GENOME RESEARCH

Naturally Occurring Nonpathogenic Isolates of the Plant Pathogen Pseudomonas syringae Lack a Type III Secretion System and Effector Gene Orthologues

(2008) T. J. Mohr et al.   JOURNAL OF BACTERIOLOGY

Roadmap to New Virulence Determinants inPseudomonas syringae: Insights from Comparative Genomics and Genome Organization

(2008) Magdalen Lindeberg et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

A Draft Genome Sequence ofPseudomonas syringaepv.tomatoT1 Reveals a Type III Effector Repertoire Significantly Divergent from That ofPseudomonas syringaepv.tomatoDC3000

(2008) Nalvo F. Almeida et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi

(2008) Kathryn E Holt et al.   NATURE GENETICS