Global analysis of mRNA decay intermediates inBacillus subtiliswild-type and polynucleotide phosphorylase-deletion strains

Bacillus subtilis Mutants with Knockouts of the Genes Encoding Ribonucleases RNase Y and RNase J1 Are Viable, with Major Defects in Cell Morphology, Sporulation, and Competence

(2013) S. Figaro et al.   JOURNAL OF BACTERIOLOGY

Control of Expression of the RNases J1 and J2 in Bacillus subtilis

(2013) A. Jamalli et al.   JOURNAL OF BACTERIOLOGY

SubtiWiki–a database for the model organismBacillus subtilisthat links pathway, interaction and expression information

(2013) Raphael H. Michna et al.   NUCLEIC ACIDS RESEARCH

The Role of SwrA, DegU and PD3 in fla/che Expression in B. subtilis

(2013) Serena Mordini et al.   PLoS One

Bacillus subtilis RapA Phosphatase Domain Interaction with Its Substrate, Phosphorylated Spo0F, and Its Inhibitor, the PhrA Peptide

(2012) A. R. Diaz et al.   JOURNAL OF BACTERIOLOGY

A  D-dependent antisense transcript modulates expression of the cyclic-di-AMP hydrolase GdpP in Bacillus subtilis

(2012) Y. Luo et al.   MICROBIOLOGY-SGM

RNA degradation in Bacillus subtilis: an interplay of essential endo- and exoribonucleases

(2012) Martin Lehnik-Habrink et al.   MOLECULAR MICROBIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Condition-Dependent Transcriptome Reveals High-Level Regulatory Architecture in Bacillus subtilis

(2012) P. Nicolas et al.   SCIENCE

Three Essential Ribonucleases—RNase Y, J1, and III—Control the Abundance of a Majority of Bacillus subtilis mRNAs

(2012) Sylvain Durand et al.   PLoS Genetics

Global mRNA decay analysis at single nucleotide resolution reveals segmental and positional degradation patterns in a Gram-positive bacterium

(2012) Simen M Kristoffersen et al.   GENOME BIOLOGY

Decay of a Model mRNA in Bacillus subtilis by a Combination of RNase J1 5′ Exonuclease and RNase Y Endonuclease Activities

(2011) Shiyi Yao et al.   JOURNAL OF BACTERIOLOGY

An RNA Pyrophosphohydrolase Triggers 5′-Exonucleolytic Degradation of mRNA in Bacillus subtilis

(2011) Jamie Richards et al.   MOLECULAR CELL

RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y

(2011) Martin Lehnik-Habrink et al.   MOLECULAR MICROBIOLOGY

Initiation of Decay of Bacillus subtilis rpsO mRNA by Endoribonuclease RNase Y

(2010) S. Yao et al.   JOURNAL OF BACTERIOLOGY

Gene position in a long operon governs motility development inBacillus subtilis

(2010) Loralyn M. Cozy et al.   MOLECULAR MICROBIOLOGY

A field guide to bacterial swarming motility

(2010) Daniel B. Kearns   NATURE REVIEWS MICROBIOLOGY

What is the role of RNase J in mRNA turnover?

(2010) Ciarán Condon   RNA Biology

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis

(2009) Karen Shahbabian et al.   EMBO JOURNAL

Role of the  D-Dependent Autolysins in Bacillus subtilis Population Heterogeneity

(2009) R. Chen et al.   JOURNAL OF BACTERIOLOGY

Laboratory Strains of Bacillus subtilis Do Not Exhibit Swarming Motility

(2009) J. E. Patrick et al.   JOURNAL OF BACTERIOLOGY

Insights into How RNase R Degrades Structured RNA: Analysis of the Nuclease Domain

(2009) Helen A. Vincent et al.   JOURNAL OF MOLECULAR BIOLOGY

Novel Activities of Glycolytic Enzymes inBacillus subtilis

(2009) Fabian M. Commichau et al.   MOLECULAR & CELLULAR PROTEOMICS

Ribosomes initiating translation of thehbsmRNA protect it from 5′-to-3′ exoribonucleolytic degradation by RNase J1

(2009) Roula Daou-Chabo et al.   MOLECULAR MICROBIOLOGY

The transcriptionally active regions in the genome ofBacillus subtilis

(2009) Simon Rasmussen et al.   MOLECULAR MICROBIOLOGY

Autoregulation of swrAA and Motility in Bacillus subtilis

(2008) C. Calvio et al.   JOURNAL OF BACTERIOLOGY

RNase Activity of Polynucleotide Phosphorylase Is Critical at Low Temperature in Escherichia coli and Is Complemented by RNase II

(2008) N. Awano et al.   JOURNAL OF BACTERIOLOGY

Role ofBacillus subtilisRNase J1 Endonuclease and 5′-Exonuclease Activities intrpLeader RNA Turnover

(2008) Gintaras Deikus et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

mRNA processing by RNases J1 and J2 affects Bacillus subtilis gene expression on a global scale

(2008) Ulrike Mäder et al.   MOLECULAR MICROBIOLOGY

Structural insights into the dual activity of RNase J

(2008) Inés Li de la Sierra-Gallay et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY