H2A.Z/H2B.Z double-variant nucleosomes inhabit the AT-rich promoter regions of thePlasmodium falciparumgenome

H2A.Z and H2B.Z double-variant nucleosomes define intergenic regions and dynamically occupyvargene promoters in the malaria parasitePlasmodium falciparum

(2013) Michaela Petter et al.   MOLECULAR MICROBIOLOGY

Plasmodium falciparumcentromeres display a unique epigenetic makeup and cluster prior to and during schizogony

(2012) Wieteke A. M. Hoeijmakers et al.   CELLULAR MICROBIOLOGY

A unified phylogeny-based nomenclature for histone variants

(2012) Paul B Talbert et al.   Epigenetics & Chromatin

Canonical and variant histones of protozoan parasites

(2011) Maria Carolina Dalmasso   Frontiers in Bioscience-Landmark

Linear amplification for deep sequencing

(2011) Wieteke A M Hoeijmakers et al.   Nature Protocols

Expression of P. falciparum var Genes Involves Exchange of the Histone Variant H2A.Z at the Promoter

(2011) Michaela Petter et al.   PLoS Pathogens

In silico and biological survey of transcription-associated proteins implicated in the transcriptional machinery during the erythrocytic development of Plasmodium falciparum

(2010) Emmanuel Bischoff et al.   BMC GENOMICS

Epigenetics in Plasmodium: What Do We Really Know? : Fig. 1.

(2010) Catherine J. Merrick et al.   EUKARYOTIC CELL

Chromatin-Mediated Epigenetic Regulation in the Malaria Parasite Plasmodium falciparum

(2010) Liwang Cui et al.   EUKARYOTIC CELL

Malaria: Could its unusual epigenome be the weak spot?

(2010) Adriana M. Salcedo-Amaya et al.   INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY

Histone variants — ancient wrap artists of the epigenome

(2010) Paul B. Talbert et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

A Major Role for the Plasmodium falciparum ApiAP2 Protein PfSIP2 in Chromosome End Biology

(2010) Christian Flueck et al.   PLoS Pathogens

H2A.Z Demarcates Intergenic Regions of the Plasmodium falciparum Epigenome That Are Dynamically Marked by H3K9ac and H3K4me3

(2010) Richárd Bártfai et al.   PLoS Pathogens

Contribution of histone sequence preferences to nucleosome organization: proposed definitions and methodology

(2010) Noam Kaplan et al.   GENOME BIOLOGY

Epigenetic specification of centromeresThis paper is one of a selection of papers published in this Special Issue, entitled 29th Annual International Asilomar Chromatin and Chromosomes Conference, and has undergone the Journal’s usual peer review process.

(2009) Yamini Dalal   Biochemistry and Cell Biology

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Genome-wide Analysis of Heterochromatin Associates Clonally Variant Gene Regulation with Perinuclear Repressive Centers in Malaria Parasites

(2009) Jose-Juan Lopez-Rubio et al.   Cell Host & Microbe

Four histone variants mark the boundaries of polycistronic transcription units in Trypanosoma brucei

(2009) T. N. Siegel et al.   GENES & DEVELOPMENT

Toxoplasma H2A Variants Reveal Novel Insights into Nucleosome Composition and Functions for this Histone Family

(2009) Maria C. Dalmasso et al.   JOURNAL OF MOLECULAR BIOLOGY

Global Histone Analysis by Mass Spectrometry Reveals a High Content of Acetylated Lysine Residues in the Malaria ParasitePlasmodium falciparum

(2009) Morten B. Trelle et al.   JOURNAL OF PROTEOME RESEARCH

Dynamic histone H3 epigenome marking during the intraerythrocytic cycle of Plasmodium falciparum

(2009) A. M. Salcedo-Amaya et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

What controls nucleosome positions?

(2009) Eran Segal et al.   TRENDS IN GENETICS

Plasmodium falciparum Heterochromatin Protein 1 Marks Genomic Loci Linked to Phenotypic Variation of Exported Virulence Factors

(2009) Christian Flueck et al.   PLoS Pathogens

Trypanosome H2Bv replaces H2B in nucleosomes enriched for H3 K4 and K76 trimethylation

(2008) Veena Mandava et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Transcriptional control and gene silencing inPlasmodium falciparum

(2008) Bradley I. Coleman et al.   CELLULAR MICROBIOLOGY

Control of gene expression in Plasmodium falciparum – Ten years on

(2008) Paul Horrocks et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

The DNA-encoded nucleosome organization of a eukaryotic genome

(2008) Noam Kaplan et al.   NATURE

PlasmoDB: a functional genomic database for malaria parasites

(2008) C. Aurrecoechea et al.   NUCLEIC ACIDS RESEARCH

Specific DNA-binding by Apicomplexan AP2 transcription factors

(2008) E. K. De Silva et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA