Multidisciplinary perspectives on bacterial genome organization and dynamics

Predicting the Effect of Ions on the Conformation of the H-NS Dimerization Domain

(2012) Jocelyne Vreede et al.   BIOPHYSICAL JOURNAL

Higher-order chromatin structure: bridging physics and biology

(2012) Geoffrey Fudenberg et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Silencing of foreign DNA in bacteria

(2012) Sabrina S Ali et al.   CURRENT OPINION IN MICROBIOLOGY

A MatP-divisome interaction coordinates chromosome segregation with cell division inE. coli

(2012) Olivier Espéli et al.   EMBO JOURNAL

Molecular Basis for a Protein-Mediated DNA-Bridging Mechanism that Functions in Condensation of the E. coli Chromosome

(2012) Pauline Dupaigne et al.   MOLECULAR CELL

Evidence of non-random mutation rates suggests an evolutionary risk management strategy

(2012) Iñigo Martincorena et al.   NATURE

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

(2012) Maxim Imakaev et al.   NATURE METHODS

Physical manipulation of the Escherichia coli chromosome reveals its soft nature

(2012) J. Pelletier et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Galactose repressor mediated intersegmental chromosomal connections in Escherichia coli

(2012) Z. Qian et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Rates of Gyrase Supercoiling and Transcription Elongation Control Supercoil Density in a Bacterial Chromosome

(2012) Nikolay Rovinskiy et al.   PLoS Genetics

Location and dynamics of an active promoter inEscherichia coliK-12

(2011) María-Antonia Sánchez-Romero et al.   BIOCHEMICAL JOURNAL

Super-Resolution Imaging of the Nucleoid-Associated Protein HU in Caulobacter crescentus

(2011) Steven F. Lee et al.   BIOPHYSICAL JOURNAL

The Three-Dimensional Architecture of a Bacterial Genome and Its Alteration by Genetic Perturbation

(2011) Mark A. Umbarger et al.   MOLECULAR CELL

DNA supercoiling is differentially regulated by environmental factors and FIS in Escherichia coli and Salmonella enterica

(2011) Andrew D. S. Cameron et al.   MOLECULAR MICROBIOLOGY

Genome architectures revealed by tethered chromosome conformation capture and population-based modeling

(2011) Reza Kalhor et al.   NATURE BIOTECHNOLOGY

A model for Escherichia coli chromosome packaging supports transcription factor-induced DNA domain formation

(2011) Miriam Fritsche et al.   NUCLEIC ACIDS RESEARCH

Structural basis for recognition of AT-rich DNA by unrelated xenogeneic silencing proteins

(2011) B. R. G. Gordon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Gene order and chromosome dynamics coordinate spatiotemporal gene expression during the bacterial growth cycle

(2011) P. Sobetzko et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chromosome Organization by a Nucleoid-Associated Protein in Live Bacteria

(2011) W. Wang et al.   SCIENCE

Chromosomal Macrodomains and Associated Proteins: Implications for DNA Organization and Replication in Gram Negative Bacteria

(2011) Remus T. Dame et al.   PLoS Genetics

Effects of nucleoid-associated proteins on bacterial chromosome structure and gene expression

(2010) Douglas F Browning et al.   CURRENT OPINION IN MICROBIOLOGY

Mechanics of DNA bridging by bacterial condensin MukBEF in vitro and in singulo

(2010) Zoya M Petrushenko et al.   EMBO JOURNAL

Chromosomal periodicity and positional networks of genes in Escherichia coli

(2010) Anthony Mathelier et al.   Molecular Systems Biology

A spindle-like apparatus guides bacterial chromosome segregation

(2010) Jerod L. Ptacin et al.   NATURE CELL BIOLOGY

Strong intranucleoid interactions organize the Escherichia coli chromosome into a nucleoid filament

(2010) P. A. Wiggins et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Active Transcription of rRNA Operons Condenses the Nucleoid in Escherichia coli: Examining the Effect of Transcription on Nucleoid Structure in the Absence of Transertion

(2009) J. E. Cabrera et al.   JOURNAL OF BACTERIOLOGY

Spatially confined folding of chromatin in the interphase nucleus

(2009) J. Mateos-Langerak et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The MatP/matS Site-Specific System Organizes the Terminus Region of the E. coli Chromosome into a Macrodomain

(2008) Romain Mercier et al.   CELL

The Major Architects of Chromatin: Architectural Proteins in Bacteria, Archaea and Eukaryotes

(2008) Martijn S. Luijsterburg et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

Selective repression by Fis and H-NS at theEscherichia coli dpspromoter

(2008) David C. Grainger et al.   MOLECULAR MICROBIOLOGY