Origins and functional diversification of salinity-responsive Na+, K+ATPase α1 paralogs in salmonids

The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates

(2014) Camille Berthelot et al.   Nature Communications

Understanding salmonid biology from the Atlantic salmon genome

(2013) William S. Davidson   GENOME

Locally Duplicated Ohnologs Evolve Faster Than Nonlocally Duplicated Ohnologs in Arabidopsis and Rice

(2013) Yupeng Wang   Genome Biology and Evolution

Identification of a Mutant α1 Na/K-ATPase That Pumps but Is Defective in Signal Transduction

(2013) Fangfang Lai et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Differential regulation of sodium-potassium pump isoforms during smolt development and seawater exposure of Atlantic salmon

(2013) S. D. McCormick et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Parallel and nonparallel genome-wide divergence among replicate population pairs of freshwater and anadromous Atlantic salmon

(2013) Charles Perrier et al.   MOLECULAR ECOLOGY

Genome duplication and multiple evolutionary origins of complex migratory behavior in Salmonidae

(2013) Markos A. Alexandrou et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Crystal structure of a Na+-bound Na+,K+-ATPase preceding the E1P state

(2013) Ryuta Kanai et al.   NATURE

Identification of ATP1A3 Mutations by Exome Sequencing as the Cause of Alternating Hemiplegia of Childhood in Japanese Patients

(2013) Atsushi Ishii et al.   PLoS One

Crystal Structure of Na + , K + -ATPase in the Na + -Bound State

(2013) Maria Nyblom et al.   SCIENCE

Roles of three branchial Na+-K+-ATPase α-subunit isoforms in freshwater adaptation, seawater acclimation, and active ammonia excretion in Anabas testudineus

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Genomic arrangement of salinity tolerance QTLs in salmonids: A comparative analysis of Atlantic salmon (Salmo salar) with Arctic charr (Salvelinus alpinus) and rainbow trout (Oncorhynchus mykiss)

(2012) Joseph D Norman et al.   BMC GENOMICS

Differential expression of Na+, K+-ATPase α-1 isoforms during seawater acclimation in the amphidromous galaxiid fish Galaxias maculatus

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Heterozygous de-novo mutations in ATP1A3 in patients with alternating hemiplegia of childhood: a whole-exome sequencing gene-identification study

(2012) Hendrik Rosewich et al.   LANCET NEUROLOGY

Genome-wide association reveals genetic basis for the propensity to migrate in wild populations of rainbow and steelhead trout

(2012) Benjamin C. Hecht et al.   MOLECULAR ECOLOGY

Evolution of mitochondrial-encoded cytochrome oxidase subunits in endothermic fish: The importance of taxon-sampling in codon-based models

(2012) Alexander G. Little et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The genomic basis of adaptive evolution in threespine sticklebacks

(2012) Felicity C. Jones et al.   NATURE

De novo mutations in ATP1A3 cause alternating hemiplegia of childhood

(2012) Erin L Heinzen et al.   NATURE GENETICS

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

Genomicus: five genome browsers for comparative genomics in eukaryota

(2012) Alexandra Louis et al.   NUCLEIC ACIDS RESEARCH

Framing the Salmonidae Family Phylogenetic Portrait: A More Complete Picture from Increased Taxon Sampling

(2012) Alexis Crête-Lafrenière et al.   PLoS One

Community-wide convergent evolution in insect adaptation to toxic cardenolides by substitutions in the Na,K-ATPase

(2012) S. Dobler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Resolution of ray-finned fish phylogeny and timing of diversification

(2012) T. J. Near et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Parallel Molecular Evolution in an Herbivore Community

(2012) Y. Zhen et al.   SCIENCE

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

The genetic basis of salinity tolerance traits in Arctic charr (Salvelinus alpinus)

(2011) Joseph D Norman et al.   BMC GENETICS

CONVERGENCE, ADAPTATION, AND CONSTRAINT

(2011) Jonathan B. Losos   EVOLUTION

Contrasting patterns of evolution following whole genome versus tandem duplication events in Populus

(2011) E. Rodgers-Melnick et al.   GENOME RESEARCH

Switching of Na+, K+-ATPase isoforms by salinity and prolactin in the gill of a cichlid fish

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An Improved Likelihood Ratio Test for Detecting Site-Specific Functional Divergence among Clades of Protein-Coding Genes

(2011) Cameron J. Weadick et al.   MOLECULAR BIOLOGY AND EVOLUTION

The evolution of cardenolide-resistant forms of Na+,K+-ATPase in Danainae butterflies

(2011) MATTHEW L. AARDEMA et al.   MOLECULAR ECOLOGY

Migraine- and dystonia-related disease-mutations of Na+/K+-ATPases: Relevance of behavioral studies in mice to disease symptoms and neurological manifestations in humans

(2011) Pernille Bøttger et al.   NEUROSCIENCE AND BIOBEHAVIORAL REVIEWS

Ensembl 2012

(2011) P. Flicek et al.   NUCLEIC ACIDS RESEARCH

Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome

(2010) Jong S Leong et al.   BMC GENOMICS

High salinity tolerance in eggs and fry of a brackish Esox lucius population

(2010) A. T. JØRGENSEN et al.   FISHERIES MANAGEMENT AND ECOLOGY

Identification of Local- and Habitat-Dependent Selection: Scanning Functionally Important Genes in Nine-Spined Sticklebacks (Pungitius pungitius)

(2010) T. Shikano et al.   MOLECULAR BIOLOGY AND EVOLUTION

A High Incidence of Selection on Physiologically Important Genes in the Three-Spined Stickleback, Gasterosteus aculeatus

(2010) Y. Shimada et al.   MOLECULAR BIOLOGY AND EVOLUTION

Statistical Properties of the Branch-Site Test of Positive Selection

(2010) Z. Yang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Neurological disease mutations compromise a C-terminal ion pathway in the Na+/K+-ATPase

(2010) Hanne Poulsen et al.   NATURE

The evolution of gene duplications: classifying and distinguishing between models

(2010) Hideki Innan et al.   NATURE REVIEWS GENETICS

Bias in Plant Gene Content Following Different Sorts of Duplication: Tandem, Whole-Genome, Segmental, or by Transposition

(2009) Michael Freeling   Annual Review of Plant Biology

Distinct freshwater and seawater isoforms of Na+/K+-ATPase in gill chloride cells of Atlantic salmon

(2009) S. D. McCormick et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Gene Conversion Among Paralogs Results in Moderate False Detection of Positive Selection Using Likelihood Methods

(2009) Claudio Casola et al.   JOURNAL OF MOLECULAR EVOLUTION

Crystal structure of the sodium–potassium pump at 2.4 Å resolution

(2009) Takehiro Shinoda et al.   NATURE

The evolutionary significance of ancient genome duplications

(2009) Yves Van de Peer et al.   NATURE REVIEWS GENETICS

The gene balance hypothesis: implications for gene regulation, quantitative traits and evolution

(2009) James A. Birchler et al.   NEW PHYTOLOGIST

Crystal structure of the sodium-potassium pump (Na+,K+-ATPase) with bound potassium and ouabain

(2009) H. Ogawa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interpopulation differences in expression of candidate genes for salinity tolerance in winter migrating anadromous brown trout (Salmo trutta L.)

(2008) Peter F Larsen et al.   BMC GENETICS

A salmonid EST genomic study: genes, duplications, phylogeny and microarrays

(2008) Ben F Koop et al.   BMC GENOMICS

Multiplicity of expression of Na+,K+-ATPase  -subunit isoforms in the gill of Atlantic salmon (Salmo salar): cellular localisation and absolute quantification in response to salinity change

(2008) S. S. Madsen et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Importance for Absorption of Na+ from Freshwater of Lysine, Valine and Serine Substitutions in the α1a-Isoform of Na,K-ATPase in the Gills of Rainbow Trout (Oncorhynchus mykiss) and Atlantic Salmon (Salmo salar)

(2008) Peter Leth Jorgensen   JOURNAL OF MEMBRANE BIOLOGY

Rainbow Smelt (Osmerus mordax) Genomic Library and EST Resources

(2008) K. R. von Schalburg et al.   MARINE BIOTECHNOLOGY

The structure of the Na+,K+-ATPase and mapping of isoform differences and disease-related mutations

(2008) J. P. Morth et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Importance of Lineage-Specific Expansion of Plant Tandem Duplicates in the Adaptive Response to Environmental Stimuli

(2008) K. Hanada et al.   PLANT PHYSIOLOGY