Wheat alleles introgress into selfing wild relatives: empirical estimates from approximate Bayesian computation inAegilops triuncialis

Lr1-mediated leaf rust resistance pathways of transgenic wheat lines revealed by a gene expression study using the Affymetrix GeneChip® Wheat Genome Array

(2014) Santosh Kumar et al.   MOLECULAR BREEDING

Phylogenetic reconstruction and diversification of the Triticeae (Poaceae) based on single-copy nuclear Acc1 and Pgk1 gene data

(2013) Xing Fan et al.   BIOCHEMICAL SYSTEMATICS AND ECOLOGY

Hybridization and speciation

(2013) R. Abbott et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Spontaneous wheat-Aegilops biuncialis, Ae. geniculata and Ae. triuncialis amphiploid production, a potential way of gene transference

(2013) I. Loureiro et al.   SPANISH JOURNAL OF AGRICULTURAL RESEARCH

Approximate Bayesian Computation

(2013) Mikael Sunnåker et al.   PLoS Computational Biology

Identifying genetic signatures of selection in a non-model species, alpine gentian (Gentiana nivalis L.), using a landscape genetic approach

(2012) Helen Bothwell et al.   CONSERVATION GENETICS

Genome-specific introgression between wheat and its wild relativeAegilops triuncialis

(2012) C. Parisod et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Genomic asymmetry in allopolyploid plants: wheat as a model

(2012) M. Feldman et al.   JOURNAL OF EXPERIMENTAL BOTANY

A Bayesian analysis of gene flow from crops to their wild relatives: cultivated (Lactuca sativaL.) and prickly lettuce (L. serriolaL.) and the recent expansion ofL. serriolain Europe

(2012) BRIGITTE UWIMANA et al.   MOLECULAR ECOLOGY

Illegal gene flow from transgenic creeping bentgrass: the saga continues

(2012) ALLISON A SNOW   MOLECULAR ECOLOGY

New Genes in Traditional Seed Systems: Diffusion, Detectability and Persistence of Transgenes in a Maize Metapopulation

(2012) Joost van Heerwaarden et al.   PLoS One

abc: an R package for approximate Bayesian computation (ABC)

(2012) Katalin Csilléry et al.   Methods in Ecology and Evolution

Gene flow among wild and domesticated almond species: insights from chloroplast and nuclear markers

(2011) Malou Delplancke et al.   Evolutionary Applications

Gene flow between wheat and wild relatives: empirical evidence from Aegilops geniculata, Ae. neglecta and Ae. triuncialis

(2011) Nils Arrigo et al.   Evolutionary Applications

Recent long-distance transgene flow into wild populations conforms to historical patterns of gene flow in cotton (Gossypium hirsutum) at its centre of origin

(2011) A. WEGIER et al.   MOLECULAR ECOLOGY

The coupling hypothesis: why genome scans may fail to map local adaptation genes

(2011) NICOLAS BIERNE et al.   MOLECULAR ECOLOGY

Competitive Performance of Transgenic Wheat Resistant to Powdery Mildew

(2011) Olena Kalinina et al.   PLoS One

Transgene introgression in crop relatives: molecular evidence and mitigation strategies

(2011) Charles Kwit et al.   TRENDS IN BIOTECHNOLOGY

Approximate Bayesian Computation in Evolution and Ecology

(2010) Mark A. Beaumont   Annual Review of Ecology Evolution and Systematics

Secondary contact between Lycaeides idas and L. melissa in the Rocky Mountains: extensive admixture and a patchy hybrid zone

(2010) Zachariah Gompert et al.   MOLECULAR ECOLOGY

Long-term persistence of crop alleles in weedy populations of wild radish (Raphanus raphanistrum)

(2010) A. A. Snow et al.   NEW PHYTOLOGIST

Origin and expansion of the allotetraploid Aegilops geniculata, a wild relative of wheat

(2010) Nils Arrigo et al.   NEW PHYTOLOGIST

Approximate Bayesian Computation (ABC) in practice

(2010) Katalin Csilléry et al.   TRENDS IN ECOLOGY & EVOLUTION

Evolution of the mutation rate

(2010) Michael Lynch   TRENDS IN GENETICS

Hybridization in a Commercial Production Field between Imidazolinone-Resistant Winter Wheat and Jointed Goatgrass (Aegilops cylindrica) Results in Pollen-Mediated Gene Flow of Imi1

(2010) Alejandro Perez-Jones et al.   WEED SCIENCE

Gene flow from genetically modified rice to its wild relatives: Assessing potential ecological consequences

(2009) Bao-Rong Lu et al.   BIOTECHNOLOGY ADVANCES

Evaluating the impact of scoring parameters on the structure of intra-specific genetic variation using RawGeno, an R package for automating AFLP scoring.

(2009) Nils Arrigo et al.   BMC BIOINFORMATICS

Genome evolution in allopolyploid wheat—a revolutionary reprogramming followed by gradual changes

(2009) Moshe Feldman et al.   Journal of Genetics and Genomics

Out of the swamp: unidirectional hybridization with weedy species may explain the prevalence of Amaranthus tuberculatus as a weed

(2009) Federico Trucco et al.   NEW PHYTOLOGIST

Testing coexistence and genetic containment for an autogamous crop

(2009) Tianyu Wang et al.   TRANSGENIC RESEARCH

quantiNemo: an individual-based program to simulate quantitative traits with explicit genetic architecture in a dynamic metapopulation

(2008) S. Neuenschwander et al.   BIOINFORMATICS

An Approximate Bayesian Computation Approach to Overcome Biases That Arise When Using Amplified Fragment Length Polymorphism Markers to Study Population Structure

(2008) Matthieu Foll et al.   GENETICS

Relationships among levels of biodiversity and the relevance of intraspecific diversity in conservation – a project synopsis

(2008) F. Gugerli et al.   PERSPECTIVES IN PLANT ECOLOGY EVOLUTION AND SYSTEMATICS

Hypothesis: Transgene establishment in wild relatives of wheat can be prevented by utilizing the Ph1 gene as a senso stricto chaperon to prevent homoeologous recombination

(2008) Sarit Weissmann et al.   PLANT SCIENCE

Do escaped transgenes persist in nature? The case of an herbicide resistance transgene in a weedy Brassica rapa population

(2007) S. I. WARWICK et al.   MOLECULAR ECOLOGY