Transcriptome-wide polymorphisms of red abalone (Haliotis rufescens) reveal patterns of gene flow and local adaptation

The simple fool's guide to population genomics via RNA-Seq: an introduction to high-throughput sequencing data analysis

(2012) Pierre De Wit et al.   Molecular Ecology Resources

CO2 induced seawater acidification impacts sea urchin larval development II: Gene expression patterns in pluteus larvae

(2011) M. Stumpp et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Integrative analysis of environmental sequences using MEGAN4

(2011) D. H. Huson et al.   GENOME RESEARCH

Health and Survival of Red AbaloneHaliotis rufescensfrom San Miguel Island, California, USA, in a Laboratory Simulation of La Niña and El Niño Conditions

(2011) James D. Moore et al.   JOURNAL OF AQUATIC ANIMAL HEALTH

The ocean acidification seascape and its relationship to the performance of calcifying marine invertebrates: Laboratory experiments on the development of urchin larvae framed by environmentally-relevant pCO2/pH

(2011) Pauline C. Yu et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Impacts of climate change on European marine ecosystems: Observations, expectations and indicators

(2011) C.J.M. Philippart et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Response of intertidal populations to climate: Effects of extreme events versus long term change

(2011) David S. Wethey et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Climate change cascades: Shifts in oceanography, species' ranges and subtidal marine community dynamics in eastern Tasmania

(2011) Craig R. Johnson et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Elevated seawater CO2 concentrations impair larval development and reduce larval survival in endangered northern abalone (Haliotis kamtschatkana)

(2011) Ryan N. Crim et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Impacts of climate change in a global hotspot for temperate marine biodiversity and ocean warming

(2011) Thomas Wernberg et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

The effects of elevated carbon dioxide concentrations on the metamorphosis, size, and survival of larval hard clams (Mercenaria mercenaria), bay scallops (Argopecten irradians), and Eastern oysters (Crassostrea virginica)

(2011) Stephanie C. Talmage et al.   LIMNOLOGY AND OCEANOGRAPHY

Detecting range shifts among Australian fishes in response to climate change

(2011) David J. Booth et al.   MARINE AND FRESHWATER RESEARCH

Observed climate change in Australian marine and freshwater environments

(2011) Janice M. Lough et al.   MARINE AND FRESHWATER RESEARCH

Comparison ofFSToutlier tests for SNP loci under selection

(2011) SHAWN R. NARUM et al.   Molecular Ecology Resources

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

Next-generation transcriptome assembly

(2011) Jeffrey A. Martin et al.   NATURE REVIEWS GENETICS

OCEAN ACIDIFICATION IN THE CALIFORNIA CURRENT SYSTEM

(2011) Claudine Hauri et al.   OCEANOGRAPHY

Ocean Acidification: Present Conditions and Future Changes in a High-CO2 World

(2011) Richard Feely et al.   OCEANOGRAPHY

Genome-wide polymorphisms show unexpected targets of natural selection

(2011) M. H. Pespeni et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Intraspecies and interspecies hybrids in Haliotis: natural and experimental evidence and its impact on abalone aquaculture

(2011) Fabiola Lafarga de la Cruz et al.   Reviews in Aquaculture

Development of genetic markers in abalone through construction of a SNP database

(2010) J.-H. Kang et al.   ANIMAL GENETICS

The Effect of Ocean Acidification on Calcifying Organisms in Marine Ecosystems: An Organism-to-Ecosystem Perspective

(2010) Gretchen E. Hofmann et al.   Annual Review of Ecology Evolution and Systematics

Local Adaptation in Marine Invertebrates

(2010) Eric Sanford et al.   Annual Review of Marine Science

Ocean oxygen minima expansions and their biological impacts

(2010) Lothar Stramma et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Meta-analysis reveals negative yet variable effects of ocean acidification on marine organisms

(2010) Kristy J. Kroeker et al.   ECOLOGY LETTERS

LOCAL ADAPTATION IN A CHANGING WORLD: THE ROLES OF GENE-FLOW, MUTATION, AND SEXUAL REPRODUCTION

(2010) Ace North et al.   EVOLUTION

USING ISOLATION BY DISTANCE AND EFFECTIVE DENSITY TO ESTIMATE DISPERSAL SCALES IN ANEMONEFISH

(2010) Malin L. Pinsky et al.   EVOLUTION

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Footprints of climate change in the Arctic marine ecosystem

(2010) PAUL WASSMANN et al.   GLOBAL CHANGE BIOLOGY

Ocean acidification and warming will lower coral reef resilience

(2010) KENNETH R. N. ANTHONY et al.   GLOBAL CHANGE BIOLOGY

Rising environmental temperatures and biogeography: poleward range contraction of the blue mussel, Mytilus edulis L., in the western Atlantic

(2010) Sierra J. Jones et al.   JOURNAL OF BIOGEOGRAPHY

The physiology of climate change: how potentials for acclimatization and genetic adaptation will determine 'winners' and 'losers'

(2010) G. N. Somero   JOURNAL OF EXPERIMENTAL BIOLOGY

Climate change effects on fishes and fisheries: towards a cause-and-effect understanding

(2010) H. O. Pörtner et al.   JOURNAL OF FISH BIOLOGY

Processes influencing seasonal hypoxia in the northern California Current System

(2010) T. P. Connolly et al.   JOURNAL OF GEOPHYSICAL RESEARCH

Response of Red Abalone Reproduction to Warm Water, Starvation, and Disease Stressors: Implications of Ocean Warming

(2010) Laura Rogers-Bennett et al.   JOURNAL OF SHELLFISH RESEARCH

Effect of pH on Gene Expression and Thermal Tolerance of Early Life History Stages of Red Abalone (Haliotis rufescens)

(2010) MacKenzie L. Zippay et al.   JOURNAL OF SHELLFISH RESEARCH

Impact of Ocean Acidification on Energy Metabolism of Oyster, Crassostrea gigas—Changes in Metabolic Pathways and Thermal Response

(2010) Gisela Lannig et al.   Marine Drugs

Elevated level of carbon dioxide affects metabolism and shell formation in oysters Crassostrea virginica (Gmelin)

(2010) E Beniash et al.   MARINE ECOLOGY PROGRESS SERIES

A Quantitative Survey of Local Adaptation and Fitness Trade‐Offs

(2009) Joe Hereford   AMERICAN NATURALIST

Gene Flow and Isolation among Populations of Marine Animals

(2009) Michael E. Hellberg   Annual Review of Ecology Evolution and Systematics

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Genomic signatures of local directional selection in a high gene flow marine organism; the Atlantic cod (Gadus morhua)

(2009) Einar E Nielsen et al.   BMC EVOLUTIONARY BIOLOGY

Comparison of aragonitic molluscan shell proteins

(2009) Takeshi Furuhashi et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

New insights into the spatial variability of the surface water carbon dioxide in varying sea ice conditions in the Arctic Ocean

(2009) Agneta Fransson et al.   CONTINENTAL SHELF RESEARCH

Genetic Connectivity Among Pink AbaloneHaliotis corrugataPopulations

(2009) Noé Díaz-Viloria et al.   JOURNAL OF SHELLFISH RESEARCH

Shellfish Face Uncertain Future in High CO2 World: Influence of Acidification on Oyster Larvae Calcification and Growth in Estuaries

(2009) A. Whitman Miller et al.   PLoS One

Fronts in Large Marine Ecosystems

(2009) Igor M. Belkin et al.   PROGRESS IN OCEANOGRAPHY

Sub-regional ecosystem variability in the Canary Current upwelling

(2009) Javier Arístegui et al.   PROGRESS IN OCEANOGRAPHY

Patterns and processes in the California Current System

(2009) David M. Checkley et al.   PROGRESS IN OCEANOGRAPHY

The Molecular Basis of Nacre Formation

(2009) N. Kroger   SCIENCE

An Acidic Matrix Protein, Pif, Is a Key Macromolecule for Nacre Formation

(2009) M. Suzuki et al.   SCIENCE

Coevolution of Interacting Fertilization Proteins

(2009) Nathaniel L. Clark et al.   PLoS Genetics

LOSITAN: A workbench to detect molecular adaptation based on a Fst-outlier method

(2008) Tiago Antao et al.   BMC BIOINFORMATICS

Oxygen declines and the shoaling of the hypoxic boundary in the California Current

(2008) Steven J. Bograd et al.   GEOPHYSICAL RESEARCH LETTERS

Impacts of ocean acidification on marine fauna and ecosystem processes

(2008) V. J. Fabry et al.   ICES JOURNAL OF MARINE SCIENCE

Genetic structure of natural populations of the California black abalone (Haliotis cracherodii Leach, 1814), a candidate for endangered species status

(2008) K.M. Gruenthal et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Genetic diversity and gene flow in collapsed and healthy abalone fisheries

(2008) K. J. MILLER et al.   MOLECULAR ECOLOGY

Evidence for Upwelling of Corrosive "Acidified" Water onto the Continental Shelf

(2008) R. A. Feely et al.   SCIENCE

Molecular cloning and distribution of a plasma membrane calcium ATPase homolog from the pearl oyster pinctada fucata

(2008) Xue Wang et al.   TSINGHUA SCIENCE AND TECHNOLOGY

genepop’007: a complete re-implementation of the genepop software for Windows and Linux

(2007) FRANÇOIS ROUSSET   Molecular Ecology Resources