Genome-wide single nucleotide polymorphism discovery and validation in adzuki bean

Genome-wide mapping of NBS-LRR genes and their association with disease resistance in soybean

(2012) Yang Kang et al.   BMC PLANT BIOLOGY

Single nucleotide polymorphism discovery from wheat next-generation sequence data

(2012) Kaitao Lai et al.   PLANT BIOTECHNOLOGY JOURNAL

EST-derived genic molecular markers: development and utilization for generating an advanced transcript map of chickpea

(2012) Shalu Choudhary et al.   THEORETICAL AND APPLIED GENETICS

SNP Discovery and Linkage Map Construction in Cultivated Tomato

(2010) K. Shirasawa et al.   DNA RESEARCH

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

ABySS: A parallel assembler for short read sequence data

(2009) J. T. Simpson et al.   GENOME RESEARCH

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH