Combining a wavelet change point and the Bayes factor for analysing chromosomal interaction data

CytoHiC: a cytoscape plugin for visual comparison of Hi-C networks

(2013) Y. Shavit et al.   BIOINFORMATICS

NuChart: An R Package to Study Gene Spatial Neighbourhoods with Multi-Omics Annotations

(2013) Ivan Merelli et al.   PLoS One

Normalization of a chromosomal contact map

(2012) Axel Cournac et al.   BMC GENOMICS

Spatial Organization of the Mouse Genome and Its Role in Recurrent Chromosomal Translocations

(2012) Yu Zhang et al.   CELL

Topological domains in mammalian genomes identified by analysis of chromatin interactions

(2012) Jesse R. Dixon et al.   NATURE

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

(2012) Maxim Imakaev et al.   NATURE METHODS

Multiscale analysis of genome-wide replication timing profiles using a wavelet-based signal-processing algorithm

(2012) Benjamin Audit et al.   Nature Protocols

Three-Dimensional Genome Architecture Influences Partner Selection for Chromosomal Translocations in Human Disease

(2012) Jesse M. Engreitz et al.   PLoS One

Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture

(2011) Eitan Yaffe et al.   NATURE GENETICS

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome

(2009) E. Lieberman-Aiden et al.   SCIENCE

Chromatin conformation signatures of cellular differentiation

(2009) James Fraser et al.   GENOME BIOLOGY

Bayes factors for genome-wide association studies: comparison withP-values

(2008) Jon Wakefield   GENETIC EPIDEMIOLOGY