Identification and functional analysis of novel and conserved microRNAs in tomato

Molecular cloning and characterisation of SlAGO family in tomato

(2013) Zhiqiang Xian et al.   BMC PLANT BIOLOGY

Profiling microRNAs and their targets in an important fleshy fruit: Tomato (Solanum lycopersicum)

(2013) Muhammad Din et al.   GENE

Identification of microRNA targets in tomato fruit development using high-throughput sequencing and degradome analysis

(2013) Rumyana Karlova et al.   JOURNAL OF EXPERIMENTAL BOTANY

In Silico Analysis the Complementarity of Tomato MicroRNA/MicroRNA* Sequences with Cucumber Mosaic Virus (CMV) Genomic RNAs

(2013) Junli Feng et al.   JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY

Characterization and expression profiling of selected microRNAs in tomato (Solanum lycopersicon) ‘Jiangshu14’

(2013) Nicholas Kibet Korir et al.   MOLECULAR BIOLOGY REPORTS

Fungal Small RNAs Suppress Plant Immunity by Hijacking Host RNA Interference Pathways

(2013) Arne Weiberg et al.   SCIENCE

SlmiR393 controls the auxin receptor homologous genes expression, and regulates sensitivity to auxin in tomato root growth

(2013) Dongbo Lin et al.   SCIENTIA HORTICULTURAE

Fine mapping of the Ph-3 gene conferring resistance to late blight (Phytophthora infestans) in tomato

(2013) Chunzhi Zhang et al.   THEORETICAL AND APPLIED GENETICS

Genome-wide identification of Dicer-like, Argonaute and RNA-dependent RNA polymerase gene families and their expression analyses in response to viral infection and abiotic stresses in Solanum lycopersicum

(2012) Miao Bai et al.   GENE

Altered Expression of MicroRNAs and Target mRNAs in Tomato Root and Stem Tissues upon Different Viral Infection

(2012) Junli Feng et al.   JOURNAL OF PHYTOPATHOLOGY

Alteration of tomato microRNAs expression during fruit development upon Cucumber mosaic virus and Tomato aspermy virus infection

(2012) Junli Feng et al.   MOLECULAR BIOLOGY REPORTS

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

A MicroRNA Superfamily Regulates Nucleotide Binding Site-Leucine-Rich Repeats and Other mRNAs

(2012) P. V. Shivaprasad et al.   PLANT CELL

Diverse correlation patterns between microRNAs and their targets during tomato fruit development indicates different modes of microRNA actions

(2012) Sara Lopez-Gomollon et al.   PLANTA

Involvement of microRNA-Mediated Gene Expression Regulation in the Pathological Development of Stem Canker Disease in Populus trichocarpa

(2012) Jia-Ping Zhao et al.   PLoS One

Identification of MicroRNAs and their targets in Helianthus

(2011) Muhammad Younas Khan Barozai et al.   MOLECULAR BIOLOGY REPORTS

psRNATarget: a plant small RNA target analysis server

(2011) Xinbin Dai et al.   NUCLEIC ACIDS RESEARCH

Function and Evolution of a MicroRNA That Regulates a Ca2+-ATPase and Triggers the Formation of Phased Small Interfering RNAs in Tomato Reproductive Growth

(2011) Ying Wang et al.   PLANT CELL

Genomic organization, phylogenetic comparison and differential expression of the SBP-box family of transcription factors in tomato

(2011) María Salinas et al.   PLANTA

Computational analysis of miRNA targets in plants: current status and challenges

(2010) X. Dai et al.   BRIEFINGS IN BIOINFORMATICS

Short RNAs in Tomato

(2010) Tamas Dalmay   Journal of Integrative Plant Biology

A quantitative targeted proteomics approach to validate predicted microRNA targets in C. elegans

(2010) Marko Jovanovic et al.   NATURE METHODS

Identification and Characterization of Novel MicroRNAs from Populus cathayana Rehd

(2010) Jing Zhou et al.   PLANT MOLECULAR BIOLOGY REPORTER

In silico analysis reveals that several tomato microRNA/microRNA∗ sequences exhibit propensity to bind to tomato leaf curl virus (ToLCV) associated genomes and most of their encoded open reading frames (ORFs)

(2010) Afsar Raza Naqvi et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Expression analysis suggests potential roles of microRNAs for phosphate and arbuscular mycorrhizal signaling inSolanum lycopersicum

(2009) Mian Gu et al.   PHYSIOLOGIA PLANTARUM

Differential and dynamic regulation of miR398 in response to ABA and salt stress in Populus tremula and Arabidopsis thaliana

(2009) Xiaoyun Jia et al.   PLANT MOLECULAR BIOLOGY

miR398 and miR408 are up-regulated in response to water deficit in Medicago truncatula

(2009) Inês Trindade et al.   PLANTA

Biotic and abiotic stress down-regulate miR398 expression in Arabidopsis

(2009) Guru Jagadeeswaran et al.   PLANTA

Bioinformatic identification and expression analysis of new microRNAs from Medicago truncatula

(2008) Zhao Sheng Zhou et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Identification of conserved microRNAs and their targets from Solanum lycopersicum Mill

(2008) Jianguang Zhang et al.   GENE

Identification of conserved microRNAs and their target genes in tomato (Lycopersicon esculentum)

(2008) Zujun Yin et al.   GENE

Sulphur starvation induces the expression of microRNA-395 and one of its target genes but in different cell types

(2008) Cintia Goulart Kawashima et al.   PLANT JOURNAL

Small RNAs in tomato fruit and leaf development

(2007) A ITAYA et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms