Population Genomics of Chlamydia trachomatis: Insights on Drift, Selection, Recombination, and Population Structure

Genome-wide recombination in Chlamydia trachomatis

(2012) Sandeep J Joseph et al.   NATURE GENETICS

Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing

(2012) Simon R Harris et al.   NATURE GENETICS

Interplay of recombination and selection in the genomes of Chlamydia trachomatis

(2011) Sandeep J Joseph et al.   Biology Direct

Anal infections with concomitant Chlamydia trachomatisgenotypes among men who have sex with men in Amsterdam, the Netherlands

(2011) Koen D Quint et al.   BMC INFECTIOUS DISEASES

Rectal infections with chlamydia and gonorrhoea in women attending a multiethnic sexually transmitted diseases urban clinic

(2011) T Hunte et al.   INTERNATIONAL JOURNAL OF STD & AIDS

Analyses of multiple-site and concurrent Chlamydia trachomatis serovar infections, and serovar tissue tropism for urogenital versus rectal specimens in male and female patients

(2011) C. J. Bax et al.   SEXUALLY TRANSMITTED INFECTIONS

Hypervirulent Chlamydia trachomatis Clinical Strain Is a Recombinant between Lymphogranuloma Venereum (L2) and D Lineages

(2011) N. Somboonna et al.   mBio

Recombination and Population Structure in Salmonella enterica

(2011) Xavier Didelot et al.   PLoS Genetics

The Impact of Recombination on dN/dS within Recently Emerged Bacterial Clones

(2011) Santiago Castillo-Ramírez et al.   PLoS Pathogens

Development of a Transformation System for Chlamydia trachomatis: Restoration of Glycogen Biosynthesis by Acquisition of a Plasmid Shuttle Vector

(2011) Yibing Wang et al.   PLoS Pathogens

An Ergatis-based prokaryotic genome annotation web server

(2010) Chris Hemmerich et al.   BIOINFORMATICS

Deciphering the assembly of the Yersinia type III secretion injectisome

(2010) Andreas Diepold et al.   EMBO JOURNAL

Chlamydia trachomatis: small genome, big challenges

(2010) Nicholas R Thomson et al.   Future Microbiology

Frameshift Mutations in a Single Novel Virulence Factor Alter the In Vivo Pathogenicity of Chlamydia trachomatis for the Female Murine Genital Tract

(2010) G. L. Sturdevant et al.   INFECTION AND IMMUNITY

Genome Sequencing of Recent Clinical Chlamydia trachomatis Strains Identifies Loci Associated with Tissue Tropism and Regions of Apparent Recombination

(2010) B. M. Jeffrey et al.   INFECTION AND IMMUNITY

The Swedish new variant of Chlamydia trachomatis: genome sequence, morphology, cell tropism and phenotypic characterization

(2010) M. Unemo et al.   MICROBIOLOGY-SGM

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

Impact of recombination on bacterial evolution

(2010) Xavier Didelot et al.   TRENDS IN MICROBIOLOGY

Co-evolution of genomes and plasmids within Chlamydia trachomatis and the emergence in Sweden of a new variant strain

(2009) Helena MB Seth-Smith et al.   BMC GENOMICS

High Prevalence of Anorectal Chlamydial Infection in HIV‐Infected Men Who Have Sex with Men in Switzerland

(2009) Thanh Dang et al.   CLINICAL INFECTIOUS DISEASES

The consequences of genetic drift for bacterial genome complexity

(2009) C.-H. Kuo et al.   GENOME RESEARCH

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

High Performance and Acceptability of Self-Collected Rectal Swabs for Diagnosis of Chlamydia trachomatis and Neisseria gonorrhoeae in Men Who Have Sex With Men and Women

(2009) Jannie J. van der Helm et al.   SEXUALLY TRANSMITTED DISEASES

Organised Genome Dynamics in the Escherichia coli Species Results in Highly Diverse Adaptive Paths

(2009) Marie Touchon et al.   PLoS Genetics

Vaccines for Chlamydia infections of the female genital tract

(2008) Louise M Hafner et al.   Future Microbiology

Characterization of Fifty Putative Inclusion Membrane Proteins Encoded in the Chlamydia trachomatis Genome

(2008) Z. Li et al.   INFECTION AND IMMUNITY

Chlamydia trachomatis infection: host immune responses and potential vaccines

(2008) L Hafner et al.   Mucosal Immunology

PSI-BLAST pseudocounts and the minimum description length principle

(2008) Stephen F. Altschul et al.   NUCLEIC ACIDS RESEARCH

Multiple Chlamydiaceae Species in Trachoma: Implications for Disease Pathogenesis and Control

(2007) Deborah Dean et al.   PLOS MEDICINE