Impact of CCR5delta32 Host Genetic Background and Disease Progression on HIV-1 Intrahost Evolutionary Processes: Efficient Hypothesis Testing through Hierarchical Phylogenetic Models

HIV-1 Transmitting Couples Have Similar Viral Load Set-Points in Rakai, Uganda

(2010) T. Déirdre Hollingsworth et al.   PLoS Pathogens

Many-core algorithms for statistical phylogenetics

(2009) M. A. Suchard et al.   BIOINFORMATICS

Bayesian Phylogeography Finds Its Roots

(2009) Philippe Lemey et al.   PLoS Computational Biology

Two-way Bayesian hierarchical phylogenetic models: An application to the co-evolution of gp120 and gp41 during and after enfuvirtide treatment

(2008) Christina M.R. Kitchen et al.   COMPUTATIONAL STATISTICS & DATA ANALYSIS

Isolation and propagation of HIV-1 on peripheral blood mononuclear cells

(2008) Angélique B van 't Wout et al.   Nature Protocols

Primary HIV-1 R5 isolates from end-stage disease display enhanced viral fitness in parallel with increased gp120 net charge

(2008) Johanna Repits et al.   VIROLOGY

Dynamic Correlation between Intrahost HIV-1 Quasispecies Evolution and Disease Progression

(2008) Ha Youn Lee et al.   PLoS Computational Biology

Disease progression and evolution of the HIV-1 env gene in 24 infected infants

(2007) Antonio Carvajal-Rodríguez et al.   INFECTION GENETICS AND EVOLUTION