Different Phylogenomic Approaches to Resolve the Evolutionary Relationships among Model Fish Species

The European sea bass Dicentrarchus labrax genome puzzle: comparative BAC-mapping and low coverage shotgun sequencing

(2010) Heiner Kuhl et al.   BMC GENOMICS

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

(2009) Nicolas Lartillot et al.   BIOINFORMATICS

Evolution of gene function and regulatory control after whole-genome duplication: Comparative analyses in vertebrates

(2009) K. S. Kassahn et al.   GENOME RESEARCH

Fast Statistical Alignment

(2009) Robert K. Bradley et al.   PLoS Computational Biology

Mitogenomic evaluation of the historical biogeography of cichlids toward reliable dating of teleostean divergences

(2008) Yoichiro Azuma et al.   BMC EVOLUTIONARY BIOLOGY

A Phylogenomic Investigation into the Origin of Metazoa

(2008) Iñaki Ruiz-Trillo et al.   MOLECULAR BIOLOGY AND EVOLUTION

Broad phylogenomic sampling improves resolution of the animal tree of life

(2008) Casey W. Dunn et al.   NATURE

Alignment Uncertainty and Genomic Analysis

(2008) K. M. Wong et al.   SCIENCE

Taxon Sampling Affects Inferences of Macroevolutionary Processes from Phylogenetic Trees

(2008) Tracy A. Heath et al.   SYSTEMATIC BIOLOGY

The quest for orthologs: finding the corresponding gene across genomes

(2008) Arnold Kuzniar et al.   TRENDS IN GENETICS

Interrelationships of the 11 gasterosteiform families (sticklebacks, pipefishes, and their relatives): A new perspective based on whole mitogenome sequences from 75 higher teleosts

(2007) Ryouka Kawahara et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION