Alkylation Damage by Lipid Electrophiles Targets Functional Protein Systems

Cysteine-Mediated Redox Signaling: Chemistry, Biology, and Tools for Discovery

(2013) Candice E. Paulsen et al.   CHEMICAL REVIEWS

Site specific identification of endogenous S-nitrosocysteine proteomes

(2013) Paschalis-Thomas Doulias et al.   Journal of Proteomics

NetGestalt: integrating multidimensional omics data over biological networks

(2013) Zhiao Shi et al.   NATURE METHODS

Supporting tool suite for production proteomics

(2011) Z.-Q. Ma et al.   BIOINFORMATICS

Structure−Activity Analysis of Diffusible Lipid Electrophiles Associated with Phospholipid Peroxidation: 4-Hydroxynonenal and 4-Oxononenal Analogues

(2011) Colleen E. McGrath et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Protein-Selective Capture to Analyze Electrophile Adduction of Hsp90 by 4-Hydroxynonenal

(2011) Rebecca E. Connor et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Formation and Signaling Actions of Electrophilic Lipids

(2011) Francisco J. Schopfer et al.   CHEMICAL REVIEWS

Relating protein adduction to gene expression changes: a systems approach

(2011) Bing Zhang et al.   Molecular BioSystems

Interaction databases on the same page

(2011) Andrei L Turinsky et al.   NATURE BIOTECHNOLOGY

Proteomics reveals a core molecular response of Pseudomonas putida F1 to acute chromate challenge

(2010) Dorothea K Thompson et al.   BMC GENOMICS

Site-Specific Protein Adducts of 4-Hydroxy-2(E)-Nonenal in Human THP-1 Monocytic Cells: Protein Carbonylation Is Diminished by Ascorbic Acid

(2010) Juan Chavez et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Quantitative reactivity profiling predicts functional cysteines in proteomes

(2010) Eranthie Weerapana et al.   NATURE

Cyclooxygenase-2 generates anti-inflammatory mediators from omega-3 fatty acids

(2010) Alison L Groeger et al.   Nature Chemical Biology

Can In Vitro Metabolism-Dependent Covalent Binding Data Distinguish Hepatotoxic from Nonhepatotoxic Drugs? An Analysis Using Human Hepatocytes and Liver S-9 Fraction

(2009) Jonathon N. Bauman et al.   CHEMICAL RESEARCH IN TOXICOLOGY

HSF1-mediated BAG3 Expression Attenuates Apoptosis in 4-Hydroxynonenal-treated Colon Cancer Cells via Stabilization of Anti-apoptotic Bcl-2 Proteins

(2009) Aaron T. Jacobs et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Comparative Temporal Proteomics of a Response Regulator (SO2426)-Deficient Strain and Wild-TypeShewanella oneidensisMR-1 During Chromate Transformation

(2009) Karuna Chourey et al.   JOURNAL OF PROTEOME RESEARCH

IDPicker 2.0: Improved Protein Assembly with High Discrimination Peptide Identification Filtering

(2009) Ze-Qiang Ma et al.   JOURNAL OF PROTEOME RESEARCH

An Azido-Biotin Reagent for Use in the Isolation of Protein Adducts of Lipid-derived Electrophiles by Streptavidin Catch and Photorelease

(2009) Hye-Young H. Kim et al.   MOLECULAR & CELLULAR PROTEOMICS

Transduction of Redox Signaling by Electrophile-Protein Reactions

(2009) T. K. Rudolph et al.   Science Signaling

Mitochondrial Protein Targets of Thiol-Reactive Electrophiles

(2008) Hansen L. Wong et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Identification of Protein Targets of 4-Hydroxynonenal Using Click Chemistry for ex Vivo Biotinylation of Azido and Alkynyl Derivatives

(2008) Andrew Vila et al.   CHEMICAL RESEARCH IN TOXICOLOGY

Comparison of the Bioactivation Potential of the Antidepressant and Hepatotoxin Nefazodone with Aripiprazole, a Structural Analog and Marketed Drug

(2008) J. N. Bauman et al.   DRUG METABOLISM AND DISPOSITION

Global Analysis of Protein Damage by the Lipid Electrophile 4-Hydroxy-2-nonenal

(2008) Simona G. Codreanu et al.   MOLECULAR & CELLULAR PROTEOMICS

Disparate proteome reactivity profiles of carbon electrophiles

(2008) Eranthie Weerapana et al.   Nature Chemical Biology