Amine-reactive Neutron-encoded Labels for Highly Plexed Proteomic Quantitation

Neutron-encoded mass signatures for multiplexed proteome quantification

(2013) Alexander S Hebert et al.   NATURE METHODS

Neutral Loss Fragmentation Pattern Based Screening for Arginine-Rich Natural Products in Xenorhabdus and Photorhabdus

(2012) Sebastian W. Fuchs et al.   ANALYTICAL CHEMISTRY

High-Resolution Enabled TMT 8-plexing

(2012) Thilo Werner et al.   ANALYTICAL CHEMISTRY

Increasing the Multiplexing Capacity of TMTs Using Reporter Ion Isotopologues with Isobaric Masses

(2012) Graeme C. McAlister et al.   ANALYTICAL CHEMISTRY

Orbitrap mass spectrometry with resolving powers above 1,000,000

(2012) Eduard Denisov et al.   INTERNATIONAL JOURNAL OF MASS SPECTROMETRY

The use of mass defect in modern mass spectrometry

(2012) Lekha Sleno   JOURNAL OF MASS SPECTROMETRY

Benchmarking stable isotope labeling based quantitative proteomics

(2012) A.F. Maarten Altelaar et al.   Journal of Proteomics

Next-generation proteomics: towards an integrative view of proteome dynamics

(2012) A. F. Maarten Altelaar et al.   NATURE REVIEWS GENETICS

Ultra High Resolution Linear Ion Trap Orbitrap Mass Spectrometer (Orbitrap Elite) Facilitates Top Down LC MS/MS and Versatile Peptide Fragmentation Modes

(2011) Annette Michalski et al.   MOLECULAR & CELLULAR PROTEOMICS

System-wide Perturbation Analysis with Nearly Complete Coverage of the Yeast Proteome by Single-shot Ultra HPLC Runs on a Bench Top Orbitrap

(2011) Nagarjuna Nagaraj et al.   MOLECULAR & CELLULAR PROTEOMICS

Proteomic and phosphoproteomic comparison of human ES and iPS cells

(2011) Douglas H Phanstiel et al.   NATURE METHODS

Gas-phase purification enables accurate, multiplexed proteome quantification with isobaric tagging

(2011) Craig D Wenger et al.   NATURE METHODS

MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics

(2011) Lily Ting et al.   NATURE METHODS

COMPASS: A suite of pre- and post-search proteomics software tools for OMSSA

(2011) Craig D. Wenger et al.   PROTEOMICS

Phosphoproteomics for the Masses

(2010) Paul A. Grimsrud et al.   ACS Chemical Biology

Peptide Labeling with Isobaric Tags Yields Higher Identification Rates Using iTRAQ 4-Plex Compared to TMT 6-Plex and iTRAQ 8-Plex on LTQ Orbitrap

(2010) Peter Pichler et al.   ANALYTICAL CHEMISTRY

Super-SILAC mix for quantitative proteomics of human tumor tissue

(2010) Tamar Geiger et al.   NATURE METHODS

Analysis of Tandem Mass Spectra by FTMS for Improved Large-Scale Proteomics with Superior Protein Quantification

(2009) Graeme C. McAlister et al.   ANALYTICAL CHEMISTRY

Full Dynamic Range Proteome Analysis of S. cerevisiae by Targeted Proteomics

(2009) Paola Picotti et al.   CELL

iTRAQ Underestimation in Simple and Complex Mixtures: “The Good, the Bad and the Ugly”

(2009) Saw Yen Ow et al.   JOURNAL OF PROTEOME RESEARCH

Performance evaluation of a high-field orbitrap mass analyzer

(2009) Alexander Makarov et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Quantitative Proteomics by Metabolic Labeling of Model Organisms

(2009) Joost W. Gouw et al.   MOLECULAR & CELLULAR PROTEOMICS

High-Performance Mass Spectrometry: Fourier Transform Ion Cyclotron Resonance at 14.5 Tesla

(2008) Tanner M. Schaub et al.   ANALYTICAL CHEMISTRY

High-Resolution Mass Spectrometers

(2008) Alan G. Marshall et al.   Annual Review of Analytical Chemistry

SILAC Mouse for Quantitative Proteomics Uncovers Kindlin-3 as an Essential Factor for Red Blood Cell Function

(2008) Marcus Krüger et al.   CELL

The Impact of Peptide Abundance and Dynamic Range on Stable-Isotope-Based Quantitative Proteomic Analyses

(2008) Corey E. Bakalarski et al.   JOURNAL OF PROTEOME RESEARCH

Temporal Profiling of the Adipocyte Proteome during Differentiation Using a Five-Plex SILAC Based Strategy

(2008) Henrik Molina et al.   JOURNAL OF PROTEOME RESEARCH

Triplex protein quantification based on stable isotope labeling by peptide dimethylation applied to cell and tissue lysates

(2008) Paul J. Boersema et al.   PROTEOMICS

Quantitation by Isobaric Labeling: Applications to Glycomics

(2007) James A. Atwood et al.   JOURNAL OF PROTEOME RESEARCH