A Chemical Proteomics Approach to Profiling the ATP-binding Proteome ofMycobacterium tuberculosis

Identification of Widespread Adenosine Nucleotide Binding in Mycobacterium tuberculosis

(2013) Charles Ansong et al.   CHEMISTRY & BIOLOGY

Chemoproteomic Profiling Identifies Changes in DNA-PK as Markers of Early Dengue Virus Infection

(2012) Michael L. Vetter et al.   ACS Chemical Biology

Function Prediction and Analysis of Mycobacterium tuberculosis Hypothetical Proteins

(2012) Gaston K. Mazandu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Metabolic Adaptation to a Disruption in Oxygen Supply during Myocardial Ischemia and Reperfusion Is Underpinned by Temporal and Quantitative Changes in the Cardiac Proteome

(2012) Xin Li et al.   JOURNAL OF PROTEOME RESEARCH

Prevalence of and risk factors for resistance to second-line drugs in people with multidrug-resistant tuberculosis in eight countries: a prospective cohort study

(2012) Tracy Dalton et al.   LANCET

The Proteomics Identifications (PRIDE) database and associated tools: status in 2013

(2012) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

Understanding Communication Signals during Mycobacterial Latency through Predicted Genome-Wide Protein Interactions and Boolean Modeling

(2012) Shubhada R. Hegde et al.   PLoS One

Annotation of the M. tuberculosis Hypothetical Orfeome: Adding Functional Information to More than Half of the Uncharacterized Proteins

(2012) Tobias Doerks et al.   PLoS One

Activity-Based Protein Profiling Reveals Mitochondrial Oxidative Enzyme Impairment and Restoration in Diet-Induced Obese Mice

(2012) Natalie C. Sadler et al.   PLoS One

Deciphering the proteome of the in vivo diagnostic reagent “purified protein derivative” from Mycobacterium tuberculosis

(2012) Yun Sang Cho et al.   PROTEOMICS

ATP Binds to Proteasomal ATPases in Pairs with Distinct Functional Effects, Implying an Ordered Reaction Cycle

(2011) David M. Smith et al.   CELL

In Situ Kinase Profiling Reveals Functionally Relevant Properties of Native Kinases

(2011) Matthew P. Patricelli et al.   CHEMISTRY & BIOLOGY

PATRIC: the Comprehensive Bacterial Bioinformatics Resource with a Focus on Human Pathogenic Species

(2011) Joseph J. Gillespie et al.   INFECTION AND IMMUNITY

The Residue Threonine 82 of DevR (DosR) Is Essential for DevR Activation and Function in Mycobacterium tuberculosis Despite Its Atypical Location

(2011) U. S. Gautam et al.   JOURNAL OF BACTERIOLOGY

ald of Mycobacterium tuberculosis Encodes both the Alanine Dehydrogenase and the Putative Glycine Dehydrogenase

(2011) M. M. Giffin et al.   JOURNAL OF BACTERIOLOGY

A Face in the Crowd: Recognizing Peptides Through Database Search

(2011) Jimmy K. Eng et al.   MOLECULAR & CELLULAR PROTEOMICS

Experimental mapping of soluble protein domains using a hierarchical approach

(2011) Jean-Denis Pedelacq et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

Effective inhibitors of the essential kinase PknB and their potential as anti-mycobacterial agents

(2011) Kathryn E.A. Lougheed et al.   TUBERCULOSIS

High throughput screening of a library based on kinase inhibitor scaffolds against Mycobacterium tuberculosis H37Rv

(2011) Robert C. Reynolds et al.   TUBERCULOSIS

High-Resolution Phenotypic Profiling Defines Genes Essential for Mycobacterial Growth and Cholesterol Catabolism

(2011) Jennifer E. Griffin et al.   PLoS Pathogens

5-Nitro-2-furoic acid hydrazones: Design, synthesis and in vitro antimycobacterial evaluation against log and starved phase cultures

(2010) Dharmarajan Sriram et al.   BIOORGANIC & MEDICINAL CHEMISTRY LETTERS

Three Protein Cocktails Mediate Delayed-Type Hypersensitivity Responses Indistinguishable from That Elicited by Purified Protein Derivative in the Guinea Pig Model ofMycobacterium tuberculosisInfection

(2010) Hongliang Yang et al.   INFECTION AND IMMUNITY

Comparative Shotgun Proteomics Using Spectral Count Data and Quasi-Likelihood Modeling

(2010) Ming Li et al.   JOURNAL OF PROTEOME RESEARCH

A chemical and phosphoproteomic characterization of dasatinib action in lung cancer

(2010) Jiannong Li et al.   Nature Chemical Biology

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

(2010) D. Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Portrait of a Pathogen: The Mycobacterium tuberculosis Proteome In Vivo

(2010) Nicole A. Kruh et al.   PLoS One

Leads for antitubercular compounds from kinase inhibitor library screens

(2010) Sophie Magnet et al.   TUBERCULOSIS

TubercuList – 10 years after

(2010) Jocelyne M. Lew et al.   TUBERCULOSIS

The structure of dihydrodipicolinate reductase (DapB) fromMycobacterium tuberculosisin three crystal forms

(2009) Robert Janowski et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Protein kinase and phosphatase signaling in Mycobacterium tuberculosis physiology and pathogenesis

(2009) Joseph Chao et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Uncovering new signaling proteins and potential drug targets through the interactome analysis of Mycobacterium tuberculosis

(2009) Tao Cui et al.   BMC GENOMICS

The Pks13/FadD32 Crosstalk for the Biosynthesis of Mycolic Acids inMycobacterium tuberculosis

(2009) Sabine Gavalda et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Forkhead-associated Domain-containing Protein Rv0019c and Polyketide-associated Protein PapA5, from Substrates of Serine/Threonine Protein Kinase PknB to Interacting Proteins ofMycobacterium tuberculosis

(2009) Meetu Gupta et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Comprehensive Identification of Staurosporine-Binding Kinases in the Hepatocyte Cell Line HepG2 using Capture Compound Mass Spectrometry (CCMS)

(2009) Jenny J. Fischer et al.   JOURNAL OF PROTEOME RESEARCH

High-throughput screening for inhibitors of Mycobacterium tuberculosis H37Rv

(2009) Subramaniam Ananthan et al.   TUBERCULOSIS

Mycobacterium tuberculosis Universal Stress Protein Rv2623 Regulates Bacillary Growth by ATP-Binding: Requirement for Establishing Chronic Persistent Infection

(2009) Joshua E. Drumm et al.   PLoS Pathogens

ATP competitive inhibitors of d-alanine–d-alanine ligase based on protein kinase inhibitor scaffolds

(2008) Gemma Triola et al.   BIOORGANIC & MEDICINAL CHEMISTRY

Mycobacterium tuberculosis interactome analysis unravels potential pathways to drug resistance

(2008) Karthik Raman et al.   BMC MICROBIOLOGY

A novel drug discovery concept for tuberculosis: Inhibition of bacterial and host cell signalling

(2008) Rita Székely et al.   IMMUNOLOGY LETTERS