TheEscherichia coliPeripheral Inner Membrane Proteome

Breaking on through to the other side: protein export through the bacterial Sec system

(2013) Katerina E. Chatzi et al.   BIOCHEMICAL JOURNAL

Alterations of protein complexes and pathways in genetic information flow and response to stimulus contribute to Escherichia coli resistance to balofloxacin

(2012) Hui Li et al.   Molecular BioSystems

In vivo protein complex topologies: Sights through a cross-linking lens

(2012) James E. Bruce   PROTEOMICS

Systematic Analysis of Native Membrane Protein Complexes inEscherichia coli

(2011) Gianluca Maddalo et al.   JOURNAL OF PROTEOME RESEARCH

Patterns of indirect protein interactions suggest a spatial organization to metabolism

(2011) Åsa Pérez-Bercoff et al.   Molecular BioSystems

Direct Membrane Binding by Bacterial Actin MreB

(2011) Jeanne Salje et al.   MOLECULAR CELL

Reorganizing the protein space at the Universal Protein Resource (UniProt)

(2011)   NUCLEIC ACIDS RESEARCH

The IntAct molecular interaction database in 2012

(2011) S. Kerrien et al.   NUCLEIC ACIDS RESEARCH

Database resources of the National Center for Biotechnology Information

(2011) E. W. Sayers et al.   NUCLEIC ACIDS RESEARCH

Investigation of protein–protein interactions in living cells by chemical crosslinking and mass spectrometry

(2010) Andrea Sinz   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Advances in understanding E. coli cell fission

(2010) Piet AJ de Boer   CURRENT OPINION IN MICROBIOLOGY

Bacterial actin MreB assembles in complex with cell shape protein RodZ

(2010) Fusinita van den Ent et al.   EMBO JOURNAL

Insights into the Extracytoplasmic Stress Response of Xanthomonas campestris pv. campestris: Role and Regulation of  E-Dependent Activity

(2010) P. Bordes et al.   JOURNAL OF BACTERIOLOGY

Complexome ofEscherichia coliEnvelope Proteins under Normal Physiological Conditions

(2010) Jian-Yi Pan et al.   JOURNAL OF PROTEOME RESEARCH

The beginning of a beautiful friendship: Cross-linking/mass spectrometry and modelling of proteins and multi-protein complexes

(2010) Juri Rappsilber   JOURNAL OF STRUCTURAL BIOLOGY

The metabolic enzyme CTP synthase forms cytoskeletal filaments

(2010) Michael Ingerson-Mahar et al.   NATURE CELL BIOLOGY

EcoCyc: a comprehensive database of Escherichia coli biology

(2010) I. M. Keseler et al.   NUCLEIC ACIDS RESEARCH

Escherichia coli condensin MukB stimulates topoisomerase IV activity by a direct physical interaction

(2010) Y. Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial translation elongation factor EF-Tu interacts and colocalizes with actin-like MreB protein

(2010) H. J. Defeu Soufo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells

(2010) Y. Taniguchi et al.   SCIENCE

Genome Sequences of Escherichia coli B strains REL606 and BL21(DE3)

(2009) Haeyoung Jeong et al.   JOURNAL OF MOLECULAR BIOLOGY

Unbiased Quantitation of Escherichia coli Membrane Proteome Using Phase Transfer Surfactants

(2009) Takeshi Masuda et al.   MOLECULAR & CELLULAR PROTEOMICS

The IntAct molecular interaction database in 2010

(2009) B. Aranda et al.   NUCLEIC ACIDS RESEARCH

The Universal Protein Resource (UniProt) in 2010

(2009)   NUCLEIC ACIDS RESEARCH

Proteomic study on gender differences in aging kidney of mice

(2009) Hanna Amelina et al.   Proteome Science

Exploring the inner membrane proteome of Escherichia coli: which proteins are eluding detection and why?

(2009) Andreas Bernsel et al.   TRENDS IN MICROBIOLOGY

EchoLOCATION: an in silico analysis of the subcellular locations of Escherichia coli proteins and comparison with experimentally derived locations

(2008) Richard S. P. Horler et al.   BIOINFORMATICS

Protein abundance profiling of the Escherichia coli cytosol

(2008) Yasushi Ishihama et al.   BMC GENOMICS

RodZ (YfgA) is required for proper assembly of the MreB actin cytoskeleton and cell shape in E. coli

(2008) Felipe O Bendezú et al.   EMBO JOURNAL

The RNase E ofEscherichia coliis a membrane-binding protein

(2008) Vanessa Khemici et al.   MOLECULAR MICROBIOLOGY

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

NCBI BLAST: a better web interface

(2008) M. Johnson et al.   NUCLEIC ACIDS RESEARCH

EcoCyc: A comprehensive view of Escherichia coli biology

(2008) I. M. Keseler et al.   NUCLEIC ACIDS RESEARCH

The Extracytoplasmic Stress Factor, σE, Is Required to Maintain Cell Envelope Integrity in Escherichia coli

(2008) Jennifer D. Hayden et al.   PLoS One

A computational analysis of protein interactions in metabolic networks reveals novel enzyme pairs potentially involved in metabolic channeling

(2007) Carola Huthmacher et al.   JOURNAL OF THEORETICAL BIOLOGY