Improving Software Performance for Peptide Electron Transfer Dissociation Data Analysis by Implementation of Charge State- and Sequence-Dependent Scoring

Evaluation of Several MS/MS Search Algorithms for Analysis of Spectra Derived from Electron Transfer Dissociation Experiments

(2009) Kumaran Kandasamy et al.   ANALYTICAL CHEMISTRY

Statistical Analysis of Peptide Electron Transfer Dissociation Fragmentation Mass Spectrometry

(2009) R. J. Chalkley et al.   ANALYTICAL CHEMISTRY

Post-acquisition ETD spectral processing for increased peptide identifications

(2009) David M. Good et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Identification of protein O-GlcNAcylation sites using electron transfer dissociation mass spectrometry on native peptides

(2009) R. J. Chalkley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Electron Capture/Transfer versus Collisionally Activated/Induced Dissociations: Solo or Duet?

(2008) Roman A. Zubarev et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Straightforward andde NovoPeptide Sequencing by MALDI-MS/MS Using a Lys-N Metalloendopeptidase

(2008) Paul J. Boersema et al.   MOLECULAR & CELLULAR PROTEOMICS

In-depth Analysis of Tandem Mass Spectrometry Data from Disparate Instrument Types

(2008) Robert J. Chalkley et al.   MOLECULAR & CELLULAR PROTEOMICS

Decision tree–driven tandem mass spectrometry for shotgun proteomics

(2008) Danielle L Swaney et al.   NATURE METHODS