In-depth Qualitative and Quantitative Profiling of Tyrosine Phosphorylation Using a Combination of Phosphopeptide Immunoaffinity Purification and Stable Isotope Dimethyl Labeling

StatQuant: a post-quantification analysis toolbox for improving quantitative mass spectrometry

(2009) Bas van Breukelen et al.   BIOINFORMATICS

Quantitative Phosphoproteomics Reveals a Cluster of Tyrosine Kinases That Mediates Src Invasive Activity in Advanced Colon Carcinoma Cells

(2009) C. Leroy et al.   CANCER RESEARCH

Distinct phosphorylation requirements regulate cortactin activation by TirEPEC and its binding to N-WASP

(2009) Elvira Nieto-Pelegrin et al.   Cell Communication and Signaling

Multiplex peptide stable isotope dimethyl labeling for quantitative proteomics

(2009) Paul J Boersema et al.   Nature Protocols

Tandem Immunoprecipitation of Phosphotyrosine-Mass Spectrometry (TIPY-MS) Indicates C19ORF19 Becomes Tyrosine-Phosphorylated and Associated with Activated Epidermal Growth Factor Receptor

(2008) Jiefei Tong et al.   JOURNAL OF PROTEOME RESEARCH

Identification of c-Src Tyrosine Kinase Substrates Using Mass Spectrometry and Peptide Microarrays

(2008) Ramars Amanchy et al.   JOURNAL OF PROTEOME RESEARCH

Global Impact of Oncogenic Src on a Phosphotyrosine Proteome

(2008) Weifeng Luo et al.   JOURNAL OF PROTEOME RESEARCH

Automated Online Sequential Isotope Labeling for Protein Quantitation Applied to Proteasome Tissue-specific Diversity

(2008) Reinout Raijmakers et al.   MOLECULAR & CELLULAR PROTEOMICS

Comparative Phosphoproteomics of Zebrafish Fyn/Yes Morpholino Knockdown Embryos

(2008) Simone Lemeer et al.   MOLECULAR & CELLULAR PROTEOMICS

Signaling networks assembled by oncogenic EGFR and c-Met

(2008) A. Guo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantitative proteomics and phosphoproteomics reveal novel insights into complexity and dynamics of the EGFR signaling network

(2008) Sandra Morandell et al.   PROTEOMICS

Triplex protein quantification based on stable isotope labeling by peptide dimethylation applied to cell and tissue lysates

(2008) Paul J. Boersema et al.   PROTEOMICS

Comparative phosphoproteomics reveals evolutionary and functional conservation of phosphorylation across eukaryotes

(2008) Jos Boekhorst et al.   GENOME BIOLOGY

Large-Scale Identification and Evolution Indexing of Tyrosine Phosphorylation Sites from Murine Brain

(2007) Bryan A. Ballif et al.   JOURNAL OF PROTEOME RESEARCH

Assigning Significance to Peptides Identified by Tandem Mass Spectrometry Using Decoy Databases

(2007) Lukas Käll et al.   JOURNAL OF PROTEOME RESEARCH