Microbial Community Composition and Ultrastructure of Granules from a Full-Scale Anammox Reactor

Full-scale partial nitritation/anammox experiences – An application survey

(2014) Susanne Lackner et al.   WATER RESEARCH

Shewanella spp. Use Acetate as an Electron Donor for Denitrification but Not Ferric Iron or Fumarate Reduction

(2013) Sukhwan Yoon et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A newly designed degenerate PCR primer based on pmoA gene for detection of nitrite-dependent anaerobic methane-oxidizing bacteria from different ecological niches

(2013) Ping Han et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Shearing of biofilms enables selective layer based microbial sampling and analysis

(2013) Yang Lu et al.   BIOTECHNOLOGY AND BIOENGINEERING

Comparative metagenomic and rRNA microbial diversity characterization using archaeal and bacterial synthetic communities

(2013) Migun Shakya et al.   ENVIRONMENTAL MICROBIOLOGY

Life in the dark: metagenomic evidence that a microbial slime community is driven by inorganic nitrogen metabolism

(2013) Sasha G Tetu et al.   ISME Journal

Predominant archaea in marine sediments degrade detrital proteins

(2013) Karen G. Lloyd et al.   NATURE

Nitrogen cycling driven by organic matter export in the South Pacific oxygen minimum zone

(2013) Tim Kalvelage et al.   Nature Geoscience

Pyrosequencing Reveals High-Temperature Cellulolytic Microbial Consortia in Great Boiling Spring after In Situ Lignocellulose Enrichment

(2013) Joseph P. Peacock et al.   PLoS One

Apatite accumulation enhances the mechanical property of anammox granules

(2013) Y.M. Lin et al.   WATER RESEARCH

Pyrosequencing Analysis of Bacterial Diversity in 14 Wastewater Treatment Systems in China

(2012) Xiaohui Wang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools

(2012) Andreas Wilke et al.   BMC BIOINFORMATICS

Inhibition of anaerobic ammonium oxidizing (anammox) enrichment cultures by substrates, metabolites and common wastewater constituents

(2012) José M. Carvajal-Arroyo et al.   CHEMOSPHERE

Comparative proteomic analysis reveals insights into anoxic growth ofMethyloversatilis universalis FAM5 on methanol and ethanol

(2012) Huijie Lu et al.   ENVIRONMENTAL MICROBIOLOGY

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

Pyrosequencing reveals highly diverse microbial communities in microbial electrolysis cells involved in enhanced H2 production from waste activated sludge

(2012) Lu Lu et al.   WATER RESEARCH

Evaluation on the microbial interactions of anaerobic ammonium oxidizers and heterotrophs in Anammox biofilm

(2012) Bing-Jie Ni et al.   WATER RESEARCH

Metagenome Analysis of a Complex Community Reveals the Metabolic Blueprint of Anammox Bacterium “Candidatus Jettenia asiatica”

(2012) Ziye Hu et al.   Frontiers in Microbiology

Pyruvate and Lactate Metabolism by Shewanella oneidensis MR-1 under Fermentation, Oxygen Limitation, and Fumarate Respiration Conditions

(2011) Grigoriy E. Pinchuk et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metagenomic Analysis of Stress Genes in Microbial Mat Communities from Antarctica and the High Arctic

(2011) Thibault Varin et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

(2011) B. J. Haas et al.   GENOME RESEARCH

A metagenome of a full-scale microbial community carrying out enhanced biological phosphorus removal

(2011) Mads Albertsen et al.   ISME Journal

454 Pyrosequencing reveals bacterial diversity of activated sludge from 14 sewage treatment plants

(2011) Tong Zhang et al.   ISME Journal

Ultrastructure of the Denitrifying Methanotroph "Candidatus Methylomirabilis oxyfera," a Novel Polygon-Shaped Bacterium

(2011) M. L. Wu et al.   JOURNAL OF BACTERIOLOGY

Molecular mechanism of anaerobic ammonium oxidation

(2011) Boran Kartal et al.   NATURE

Fine-scale bacterial community dynamics and the taxa–time relationship within a full-scale activated sludge bioreactor

(2011) George F. Wells et al.   WATER RESEARCH

Oligonucleotide primers, probes and molecular methods for the environmental monitoring of methanogenic archaea

(2011) Takashi Narihiro et al.   Microbial Biotechnology

Microbial and Physicochemical Characteristics of Compact Anaerobic Ammonium-Oxidizing Granules in an Upflow Anaerobic Sludge Blanket Reactor

(2010) B. J. Ni et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identifying biologically relevant differences between metagenomic communities

(2010) Donovan H. Parks et al.   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Sewage Treatment with Anammox

(2010) B. Kartal et al.   SCIENCE

When metagenomics meets stable-isotope probing: progress and perspectives

(2010) Yin Chen et al.   TRENDS IN MICROBIOLOGY

Identification and quantification of anammox bacteria in eight nitrogen removal reactors

(2010) Bao-lan Hu et al.   WATER RESEARCH

Autotrophic nitrogen removal from black water: Calcium addition as a requirement for settleability

(2010) M.S. de Graaff et al.   WATER RESEARCH

Performance of high-loaded ANAMMOX UASB reactors containing granular sludge

(2010) Chong-Jian Tang et al.   WATER RESEARCH

Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils

(2009) N. L. Ward et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Physicochemical characteristics of microbial granules

(2009) Xian-Wei Liu et al.   BIOTECHNOLOGY ADVANCES

Candidatus ‘Brocadia fulgida’: an autofluorescent anaerobic ammonium oxidizing bacterium

(2009) Boran Kartal et al.   FEMS MICROBIOLOGY ECOLOGY

Ignavibacterium album gen. nov., sp. nov., a moderately thermophilic anaerobic bacterium isolated from microbial mats at a terrestrial hot spring and proposal of Ignavibacteria classis nov., for a novel lineage at the periphery of green sulfur bacteria

(2009) T. Iino et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

The membrane bioreactor: A novel tool to grow anammox bacteria as free cells

(2008) Wouter R.L. van der Star et al.   BIOTECHNOLOGY AND BIOENGINEERING

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Diversity of ammonium-oxidizing bacteria in a granular sludge anaerobic ammonium-oxidizing (anammox) reactor

(2008) Zhe-Xue Quan et al.   ENVIRONMENTAL MICROBIOLOGY

A Bioinformatician's Guide to Metagenomics

(2008) V. Kunin et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Anammox bacteria: from discovery to application

(2008) J. Gijs Kuenen   NATURE REVIEWS MICROBIOLOGY

Dynamics of nitric oxide and nitrous oxide emission during full-scale reject water treatment

(2007) Marlies J. Kampschreur et al.   WATER RESEARCH

Heterotrophic activity compromises autotrophic nitrogen removal in membrane-aerated biofilms: Results of a modeling study

(2007) Susanne Lackner et al.   WATER RESEARCH