“Eco-omics”: A Review of the Application of Genomics, Transcriptomics, and Proteomics for the Study of the Ecology of Harmful Algae
Published 2013 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
“Eco-omics”: A Review of the Application of Genomics, Transcriptomics, and Proteomics for the Study of the Ecology of Harmful Algae
Authors
Keywords
Dinoflagellate, Domoic Acid, Massively Parallel Signature Sequencing, Harmful Alga, Phosphate Limitation
Journal
MICROBIAL ECOLOGY
Volume 65, Issue 4, Pages 901-915
Publisher
Springer Nature
Online
2013-04-03
DOI
10.1007/s00248-013-0220-5
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Study of Cnidarian-Algal Symbiosis in the “Omics” Age
- (2016) Eli Meyer et al. BIOLOGICAL BULLETIN
- Characterization of the Proteomic Profiles of the Brown Tide Alga Aureoumbra lagunensis under Phosphate- and Nitrogen-Limiting Conditions and of Its Phosphate Limitation-Specific Protein with Alkaline Phosphatase Activity
- (2012) Ming-Ming Sun et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Quantitative proteomic analysis of differentially expressed proteins in the toxicity-lost mutant of Alexandrium catenella (Dinophyceae) in the exponential phase
- (2012) Da-Zhi Wang et al. Journal of Proteomics
- Pseudo-nitzschia (Bacillariophyceae) species, domoic acid and amnesic shellfish poisoning: revisiting previous paradigms
- (2012) Aurélie Lelong et al. PHYCOLOGIA
- Proteomic Profiling and Protein Identification by MALDI-TOF Mass Spectrometry in Unsequenced Parasitic Nematodes
- (2012) Paul Millares et al. PLoS One
- Transcriptomic response of the red tide dinoflagellate, Karenia brevis, to nitrogen and phosphorus depletion and addition
- (2011) Jeanine S Morey et al. BMC GENOMICS
- Homology-Driven Proteomics of Dinoflagellates with Unsequenced Genomes Using MALDI-TOF/TOF and AutomatedDe NovoSequencing
- (2011) Da-Zhi Wang et al. Evidence-based Complementary and Alternative Medicine
- Comparative Genomic and Transcriptomic Characterization of the Toxigenic Marine Dinoflagellate Alexandrium ostenfeldii
- (2011) Nina Jaeckisch et al. PLoS One
- Proteome Changes Driven by Phosphorus Deficiency and Recovery in the Brown Tide-Forming Alga Aureococcus anophagefferens
- (2011) Louie L. Wurch et al. PLoS One
- Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics
- (2011) C. J. Gobler et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genomic understanding of dinoflagellates
- (2011) Senjie Lin RESEARCH IN MICROBIOLOGY
- A novel gene network inference algorithm using predictive minimum description length approach
- (2010) Vijender Chaitankar et al. BMC Systems Biology
- Nutrient-regulated transcriptional responses in the brown tide-forming alga Aureococcus anophagefferens
- (2010) Louie L. Wurch et al. ENVIRONMENTAL MICROBIOLOGY
- Net community production and dark community respiration in a Karenia brevis (Davis) bloom in West Florida coastal waters, USA
- (2010) Gary L. Hitchcock et al. HARMFUL ALGAE
- OCEAN CLIMATE CHANGE, PHYTOPLANKTON COMMUNITY RESPONSES, AND HARMFUL ALGAL BLOOMS: A FORMIDABLE PREDICTIVE CHALLENGE
- (2010) Gustaaf M. Hallegraeff JOURNAL OF PHYCOLOGY
- Transcriptome Profiling of a Toxic Dinoflagellate Reveals a Gene-Rich Protist and a Potential Impact on Gene Expression Due to Bacterial Presence
- (2010) Ahmed Moustafa et al. PLoS One
- Identification and Optimization of Classifier Genes from Multi-Class Earthworm Microarray Dataset
- (2010) Ying Li et al. PLoS One
- Grazing by Karenia brevis on Synechococcus enhances its growth rate and may help to sustain blooms
- (2009) PM Glibert et al. AQUATIC MICROBIAL ECOLOGY
- Growth, uptake, and assimilation of ammonium, nitrate, and urea, by three strains of Karenia brevis grown under low light
- (2009) Geoff Sinclair et al. HARMFUL ALGAE
- Phytoplankton in the ocean use non-phosphorus lipids in response to phosphorus scarcity
- (2009) Benjamin A. S. Van Mooy et al. NATURE
- The life of diatoms in the world's oceans
- (2009) E. Virginia Armbrust NATURE
- Retrieval of Missing Spliced Leader in Dinoflagellates
- (2009) Huan Zhang et al. PLoS One
- Biosynthesis of toxic naturally-occurring seafood contaminants
- (2009) John A. Kalaitzis et al. TOXICON
- Harmful algal blooms and eutrophication: Examining linkages from selected coastal regions of the United States
- (2008) Donald M. Anderson et al. HARMFUL ALGAE
- Eutrophication and harmful algal blooms: A scientific consensus
- (2008) J. Heisler et al. HARMFUL ALGAE
- UNDERSTANDING NITROGEN LIMITATION INAUREOCOCCUS ANOPHAGEFFERENS(PELAGOPHYCEAE) THROUGH cDNA AND qRT-PCR ANALYSIS1
- (2008) Gry Mine Berg et al. JOURNAL OF PHYCOLOGY
- Benthic-pelagic coupling in sediment-associated populations of Karenia brevis
- (2008) G. A. Sinclair et al. JOURNAL OF PLANKTON RESEARCH
- The Phaeodactylum genome reveals the evolutionary history of diatom genomes
- (2008) Chris Bowler et al. NATURE
- Annotating Genes of Known and Unknown Function by Large-Scale Coexpression Analysis
- (2008) K. Horan et al. PLANT PHYSIOLOGY
- From Stop to Start: Tandem Gene Arrangement, Copy Number and Trans-Splicing Sites in the Dinoflagellate Amphidinium carterae
- (2008) Tsvetan R. Bachvaroff et al. PLoS One
- Pentatricopeptide repeat proteins: a socket set for organelle gene expression
- (2008) C SCHMITZLINNEWEBER et al. TRENDS IN PLANT SCIENCE
- Nutrient availability in support of Karenia brevis blooms on the central West Florida Shelf: What keeps Karenia blooming?
- (2007) Gabriel A. Vargo et al. CONTINENTAL SHELF RESEARCH
- Hydrodynamic accumulation of Karenia off the west coast of Florida
- (2007) Richard P. Stumpf et al. CONTINENTAL SHELF RESEARCH
- Zooplankton and Karenia brevis in the Gulf of Mexico
- (2007) Kristen M. Lester et al. CONTINENTAL SHELF RESEARCH
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started