Alkane Biodegradation Genes from Chronically Polluted Subantarctic Coastal Sediments and Their Shifts in Response to Oil Exposure

Oleispira lenta sp. nov., a novel marine bacterium isolated from Yellow sea coastal seawater in Qingdao, China

(2012) Yan Wang et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Abundance, Dynamics, and Biogeographic Distribution of Seven Polycyclic Aromatic Hydrocarbon Dioxygenase Gene Variants in Coastal Sediments of Patagonia

(2012) Magalí S. Marcos et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Central Role of Dynamic Tidal Biofilms Dominated by Aerobic Hydrocarbonoclastic Bacteria and Diatoms in the Biodegradation of Hydrocarbons in Coastal Mudflats

(2012) Frédéric Coulon et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metagenomic Analysis of the Bioremediation of Diesel-Contaminated Canadian High Arctic Soils

(2012) Etienne Yergeau et al.   PLoS One

Assessing and Improving Methods Used in Operational Taxonomic Unit-Based Approaches for 16S rRNA Gene Sequence Analysis

(2011) Patrick D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identification of Nitrogen-Incorporating Bacteria in Petroleum-Contaminated Arctic Soils by Using [15N]DNA-Based Stable Isotope Probing and Pyrosequencing

(2011) Terrence H. Bell et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Hydrocarbon-Degrading Bacteria and the Bacterial Community Response in Gulf of Mexico Beach Sands Impacted by the Deepwater Horizon Oil Spill

(2011) Joel E. Kostka et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Are alkane hydroxylase genes (alkB) relevant to assess petroleum bioremediation processes in chronically polluted coastal sediments?

(2011) Sandrine Paisse et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Polyphasic approach for assessing changes in an autochthonous marine bacterial community in the presence of Prestige fuel oil and its biodegradation potential

(2011) Núria Jiménez et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Natural attenuation is enhanced in previously contaminated and coniferous forest soils

(2011) Sari Kauppi et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Description of Spongiibacter borealis sp. nov., isolated from Arctic seawater, and reclassification of Melitea salexigens Urios et al. 2008 as a later heterotypic synonym of Spongiibacter marinus Graeber et al. 2008 with emended descriptions of the genus Spongiibacter and Spongiibacter marinus

(2011) G. I. Jang et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Sources and distribution of aliphatic and polyaromatic hydrocarbons in coastal sediments from the Ushuaia Bay (Tierra del Fuego, Patagonia, Argentina)

(2011) Marta G. Commendatore et al.   MARINE ENVIRONMENTAL RESEARCH

Abundance and Diversity of n-Alkane-Degrading Bacteria in a Forest Soil Co-Contaminated with Hydrocarbons and Metals: A Molecular Study on alkB Homologous Genes

(2011) Alfredo Pérez-de-Mora et al.   MICROBIAL ECOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Mangrove Bacterial Diversity and the Impact of Oil Contamination Revealed by Pyrosequencing: Bacterial Proxies for Oil Pollution

(2011) Henrique Fragoso dos Santos et al.   PLoS One

Bacterial communities reflect the spatial variation in pollutant levels in Brazilian mangrove sediment

(2010) R. Peixoto et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Gene diversity of CYP153A and AlkB alkane hydroxylases in oil-degrading bacteria isolated from the Atlantic Ocean

(2010) Liping Wang et al.   ENVIRONMENTAL MICROBIOLOGY

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

(2010) Susan M. Huse et al.   ENVIRONMENTAL MICROBIOLOGY

Mangrove microniches determine the structural and functional diversity of enriched petroleum hydrocarbon-degrading consortia

(2010) Newton C.M. Gomes et al.   FEMS MICROBIOLOGY ECOLOGY

Assessment of recent sediment influence in an urban polluted subantarctic coastal ecosystem. Beagle Channel (Southern Argentina)

(2010) M.N. Gil et al.   MARINE POLLUTION BULLETIN

How a Bacterial Community Originating from a Contaminated Coastal Sediment Responds to an Oil Input

(2010) Sandrine Païssé et al.   MICROBIAL ECOLOGY

The importance of soil characteristics to the structure of alkane-degrading bacterial communities on sub-Antarctic Macquarie Island

(2010) S.M. Powell et al.   SOIL BIOLOGY & BIOCHEMISTRY

The Effects of Alignment Quality, Distance Calculation Method, Sequence Filtering, and Region on the Analysis of 16S rRNA Gene-Based Studies

(2010) Patrick D. Schloss   PLoS Computational Biology

Novel Alkane Hydroxylase Gene (alkB) Diversity in Sediments Associated with Hydrocarbon Seeps in the Timor Sea, Australia

(2009) K. Wasmund et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bacterial Communities from Shoreline Environments (Costa da Morte, Northwestern Spain) Affected by the Prestige Oil Spill

(2009) J. Alonso-Gutierrez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Newalkgenes detected in Antarctic marine sediments

(2009) Emanuele Kuhn et al.   ENVIRONMENTAL MICROBIOLOGY

Degradation of alkanes by bacteria

(2009) Fernando Rojo   ENVIRONMENTAL MICROBIOLOGY

Thalassospira xianhensis sp. nov., a polycyclic aromatic hydrocarbon-degrading marine bacterium

(2009) B. Zhao et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Aromatic hydrocarbon degradation genes from chronically polluted Subantarctic marine sediments

(2009) M.S. Marcos et al.   LETTERS IN APPLIED MICROBIOLOGY

Hydrocarbon biodegradation and soil microbial community response to repeated oil exposure

(2009) Paul F. Greenwood et al.   ORGANIC GEOCHEMISTRY

Functional Gene Abundances (nahAc, alkB, xylE) in the Assessment of the Efficacy of Bioremediation

(2008) Jani M. Salminen et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Novel aromatic ring-hydroxylating dioxygenase genes from coastal marine sediments of Patagonia

(2008) Mariana Lozada et al.   BMC MICROBIOLOGY

Biodiversity of polycyclic aromatic hydrocarbon-degrading bacteria from deep sea sediments of the Middle Atlantic Ridge

(2008) Zhisong Cui et al.   ENVIRONMENTAL MICROBIOLOGY

Assessing Soil Microbial Populations Responding to Crude-Oil Amendment at Different Temperatures Using Phylogenetic, Functional Gene (alkB) and Physiological Analyses

(2008) Natsuko Hamamura et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Structure of bacterial communities along a hydrocarbon contamination gradient in a coastal sediment

(2008) Sandrine Paissé et al.   FEMS MICROBIOLOGY ECOLOGY

Exploring the diversity of bacterial communities in sediments of urban mangrove forests

(2008) Newton C. Marcial Gomes et al.   FEMS MICROBIOLOGY ECOLOGY

Spongiibacter marinus gen. nov., sp. nov., a halophilic marine bacterium isolated from the boreal sponge Haliclona sp. 1

(2008) I. Graeber et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Melitea salexigens gen. nov., sp. nov., a gammaproteobacterium from the Mediterranean Sea

(2008) L. Urios et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Thalassospira tepidiphila sp. nov., a polycyclic aromatic hydrocarbon-degrading bacterium isolated from seawater

(2008) Y. Kodama et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Polycyclic Aromatic Hydrocarbon-Induced Structural Shift of Bacterial Communities in Mangrove Sediment

(2008) Hong Wei Zhou et al.   MICROBIAL ECOLOGY

alkB homologs in thermophilic bacteria of the genus Geobacillus

(2008) T. P. Tourova et al.   MOLECULAR BIOLOGY

Petroleomics: Chemistry of the underworld

(2008) A. G. Marshall et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Isolation and characterization of biosurfactant-producing Alcanivorax strains: hydrocarbon accession strategies and alkane hydroxylase gene analysis

(2008) Nelda L. Olivera et al.   RESEARCH IN MICROBIOLOGY