Genome-scale metabolic network reconstruction and in silico flux analysis of the thermophilic bacterium Thermus thermophilus HB27

A Comparison of Structural and Evolutionary Attributes of Escherichia coli and Thermus thermophilus Small Ribosomal Subunits: Signatures of Thermal Adaptation

(2013) Saurav Mallik et al.   PLoS One

Evaluation of biomass production, carotenoid level and antioxidant capacity produced by Thermus filiformis using fractional factorial design

(2012) Fernanda Mandelli et al.   BRAZILIAN JOURNAL OF MICROBIOLOGY

Software applications for flux balance analysis

(2012) M. Lakshmanan et al.   BRIEFINGS IN BIOINFORMATICS

Ethanol reduces mitochondrial membrane integrity and thereby impacts carbon metabolism of Saccharomyces cerevisiae

(2012) Kyung-Mi Yang et al.   FEMS YEAST RESEARCH

Genome-Scale Reconstruction and Analysis of the Metabolic Network in the Hyperthermophilic Archaeon Sulfolobus Solfataricus

(2012) Thomas Ulas et al.   PLoS One

Genome-scale reconstruction and in silico analysis of the Ralstonia eutropha H16 for polyhydroxyalkanoate synthesis, lithoautotrophic growth, and 2-methyl citric acid production

(2011) Jong Park et al.   BMC Systems Biology

Engineering strategy of yeast metabolism for higher alcohol production

(2011) Fumio Matsuda et al.   Microbial Cell Factories

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases

(2011) R. Caspi et al.   NUCLEIC ACIDS RESEARCH

Use of genome-scale metabolic models for understanding microbial physiology

(2010) Liming Liu et al.   FEBS LETTERS

Genome-scale metabolic reconstruction and in silico analysis of methylotrophic yeast Pichia pastoris for strain improvement

(2010) Bevan KS Chung et al.   Microbial Cell Factories

What is flux balance analysis?

(2010) Jeffrey D Orth et al.   NATURE BIOTECHNOLOGY

Carotenoid biosynthesis in extremophilic Deinococcus–Thermus bacteria

(2010) Bing Tian et al.   TRENDS IN MICROBIOLOGY

Connecting extracellular metabolomic measurements to intracellular flux states in yeast

(2009) Monica L Mo et al.   BMC Systems Biology

Thermus thermophilus as biological model

(2009) Felipe Cava et al.   EXTREMOPHILES

Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima

(2009) Y. Zhang et al.   SCIENCE

In silico genome-scale reconstruction and validation of theCorynebacterium glutamicummetabolic network

(2008) Kjeld Raunkjaer Kjeldsen et al.   BIOTECHNOLOGY AND BIOENGINEERING

CharacterizingEscherichia coliDH5α growth and metabolism in a complex medium using genome-scale flux analysis

(2008) Suresh Selvarasu et al.   BIOTECHNOLOGY AND BIOENGINEERING

Molecular and Physiological Role of the Trehalose-Hydrolyzing  -Glucosidase from Thermus thermophilus HB27

(2008) S. Alarico et al.   JOURNAL OF BACTERIOLOGY

Glucose- and Glucokinase-ControlledmalGene Expression inEscherichia coli

(2008) Christina Lengsfeld et al.   JOURNAL OF BACTERIOLOGY

Genome-Scale Metabolic Network Analysis of the Opportunistic Pathogen Pseudomonas aeruginosa PAO1

(2008) M. A. Oberhardt et al.   JOURNAL OF BACTERIOLOGY

Is maximization of molar yield in metabolic networks favoured by evolution?

(2007) Stefan Schuster et al.   JOURNAL OF THEORETICAL BIOLOGY