Evolutionary histories of expanded peptidase families in Schistosoma mansoni

Eukaryotic Protein Kinases (ePKs) of the Helminth Parasite Schistosoma mansoni

(2011) Luiza F Andrade et al.   BMC GENOMICS

ETE: a python Environment for Tree Exploration

(2010) Jaime Huerta-Cepas et al.   BMC BIOINFORMATICS

Structures of human proteinase 3 and neutrophil elastase - so similar yet so different

(2010) Eric Hajjar et al.   FEBS Journal

The pea aphid phylome: a complete catalogue of evolutionary histories and arthropod orthology and paralogy relationships for Acyrthosiphon pisum genes

(2010) J. Huerta-Cepas et al.   INSECT MOLECULAR BIOLOGY

PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions

(2010) J. Huerta-Cepas et al.   NUCLEIC ACIDS RESEARCH

Ongoing and future developments at the Universal Protein Resource

(2010)   NUCLEIC ACIDS RESEARCH

Schistosoma Genomics: New Perspectives on Schistosome Biology and Host-Parasite Interaction

(2009) Ze-Guang Han et al.   Annual Review of Genomics and Human Genetics

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

Analysis of regulatory protease sequences identified through bioinformatic data mining of the Schistosoma mansoni genome

(2009) David H Bos et al.   BMC GENOMICS

DOG 1.0: illustrator of protein domain structures

(2009) Jian Ren et al.   CELL RESEARCH

Lineage-Specific Differences in the Amino Acid Substitution Process

(2009) Snehalata Huzurbazar et al.   JOURNAL OF MOLECULAR BIOLOGY

A Profound Role for the Expansion of Trypsin-Like Serine Protease Family in the Evolution of Hematophagy in Mosquito

(2009) Dong-Dong Wu et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Schistosoma japonicum genome reveals features of host–parasite interplay

(2009)   NATURE

The genome of the blood fluke Schistosoma mansoni

(2009) Matthew Berriman et al.   NATURE

MEROPS: the peptidase database

(2009) Neil D. Rawlings et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Protein families reflect the metabolic diversity of organisms and provide support for functional prediction

(2009) Laila A. Nahum et al.   PHYSIOLOGICAL GENOMICS

Reduced Susceptibility to Praziquantel among Naturally Occurring Kenyan Isolates of Schistosoma mansoni

(2009) Sandra D. Melman et al.   PLoS Neglected Tropical Diseases

Anti-schistosomal Intervention Targets Identified by Lifecycle Transcriptomic Analyses

(2009) Jennifer M. Fitzpatrick et al.   PLoS Neglected Tropical Diseases

Splice-mediated Variants of Proteins (SpliVaP) – data and characterization of changes in signatures among protein isoforms due to alternative splicing

(2008) Matteo Floris et al.   BMC GENOMICS

Phylogenetic analysis reveals the presence of the Trypanosoma cruzi clade in African terrestrial mammals☆

(2008) P HAMILTON et al.   INFECTION GENETICS AND EVOLUTION

Proteomics and Phylogenetic Analysis of the Cathepsin L Protease Family of the Helminth PathogenFasciola hepatica

(2008) Mark W. Robinson et al.   MOLECULAR & CELLULAR PROTEOMICS

Turning a hobby into a job: How duplicated genes find new functions

(2008) Gavin C. Conant et al.   NATURE REVIEWS GENETICS

SchistoDB: a Schistosoma mansoni genome resource

(2008) A. Zerlotini et al.   NUCLEIC ACIDS RESEARCH

Proteomic Analysis of Skin Invasion by Blood Fluke Larvae

(2008) Elizabeth Hansell et al.   PLoS Neglected Tropical Diseases

Large-scale assignment of orthology: back to phylogenetics?

(2008) Toni Gabaldón   GENOME BIOLOGY

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

(2008) Brian J Haas et al.   GENOME BIOLOGY

Differential use of protease families for invasion by schistosome cercariae

(2007) Jan Dvořák et al.   BIOCHIMIE

RNA interference of Schistosoma mansoni cathepsin D, the apical enzyme of the hemoglobin proteolysis cascade

(2007) Maria E. Morales et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

Proteases from Schistosoma mansoni cercariae cleave IgE at solvent exposed interdomain regions

(2007) Akhmed Aslam et al.   MOLECULAR IMMUNOLOGY