PARTICLE SIMULATIONS OF MORPHOGENESIS

Integrative multicellular biological modeling: a case study of 3D epidermal development using GPU algorithms

(2010) Scott Christley et al.   BMC Systems Biology

Exploring the effects of mechanical feedback on epithelial topology

(2010) T. Aegerter-Wilmsen et al.   DEVELOPMENT

GPU accelerated simulations of bluff body flows using vortex particle methods

(2010) Diego Rossinelli et al.   JOURNAL OF COMPUTATIONAL PHYSICS

Adaptive mesh refinement for stochastic reaction–diffusion processes

(2010) Basil Bayati et al.   JOURNAL OF COMPUTATIONAL PHYSICS

Three-dimensional multispecies nonlinear tumor growth—II: Tumor invasion and angiogenesis

(2010) Hermann B. Frieboes et al.   JOURNAL OF THEORETICAL BIOLOGY

MULTISCALE BIOLOGICAL TISSUE MODELS AND FLUX-LIMITED CHEMOTAXIS FOR MULTICELLULAR GROWING SYSTEMS

(2010) NICOLA BELLOMO et al.   MATHEMATICAL MODELS & METHODS IN APPLIED SCIENCES

GENERAL DIFFUSE-INTERFACE THEORIES AND AN APPROACH TO PREDICTIVE TUMOR GROWTH MODELING

(2010) J. TINSLEY ODEN et al.   MATHEMATICAL MODELS & METHODS IN APPLIED SCIENCES

Particle-based model to simulate the micromechanics of biological cells

(2010) P. Van Liedekerke et al.   PHYSICAL REVIEW E

A Sub-Cellular Viscoelastic Model for Cell Population Mechanics

(2010) Yousef Jamali et al.   PLoS One

Fluidization of tissues by cell division and apoptosis

(2010) J. Ranft et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiparameter Computational Modeling of Tumor Invasion

(2009) E. L. Bearer et al.   CANCER RESEARCH

A Lagrangian particle method for reaction–diffusion systems on deforming surfaces

(2009) Michael Bergdorf et al.   JOURNAL OF MATHEMATICAL BIOLOGY

Multiscale modeling of emergent materials: biological and soft matter

(2009) Teemu Murtola et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Multiscale Modeling of Form and Function

(2009) A. J. Engler et al.   SCIENCE

Morphogenesis of Self-Assembled Nanocrystalline Materials of Barium Carbonate and Silica

(2009) J. M. Garcia-Ruiz et al.   SCIENCE

A Hybrid Model for Three-Dimensional Simulations of Sprouting Angiogenesis

(2008) Florian Milde et al.   BIOPHYSICAL JOURNAL

Individual-based and continuum models of growing cell populations: a comparison

(2008) Helen Byrne et al.   JOURNAL OF MATHEMATICAL BIOLOGY

Multiscale modelling and nonlinear simulation of vascular tumour growth

(2008) Paul Macklin et al.   JOURNAL OF MATHEMATICAL BIOLOGY

Accurate Coarse-Grained Modeling of Red Blood Cells

(2008) Igor V. Pivkin et al.   PHYSICAL REVIEW LETTERS

Developmental Patterning by Mechanical Signals in Arabidopsis

(2008) O. Hamant et al.   SCIENCE

A simple embedding method for solving partial differential equations on surfaces

(2007) Steven J. Ruuth et al.   JOURNAL OF COMPUTATIONAL PHYSICS