Synergy of multi-label hierarchical ensembles, data fusion, and cost-sensitive methods for gene functional inference

Fast integration of heterogeneous data sources for predicting gene function with limited annotation

(2010) Sara Mostafavi et al.   BIOINFORMATICS

Random k-Labelsets for Multilabel Classification

(2010) Grigorios Tsoumakas et al.   IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING

True Path Rule Hierarchical Ensembles for Genome-Wide Gene Function Prediction

(2010) Giorgio Valentini   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Integration of heterogeneous data sources for gene function prediction using decision templates and ensembles of learning machines

(2010) Matteo Re et al.   NEUROCOMPUTING

HIERARCHICAL CLASSIFICATION OF GENE ONTOLOGY TERMS USING THE GOstruct METHOD

(2010) ARTEM SOKOLOV et al.   Journal of Bioinformatics and Computational Biology

Structured prediction by joint kernel support estimation

(2009) Christoph H. Lampert et al.   MACHINE LEARNING

Protein function annotation by homology-based inference

(2009) Yaniv Loewenstein et al.   GENOME BIOLOGY

Sequence-based feature prediction and annotation of proteins

(2009) Agnieszka S Juncker et al.   GENOME BIOLOGY

HCGene: a software tool to support the hierarchical classification of genes

(2008) G. Valentini et al.   BIOINFORMATICS

Decision trees for hierarchical multi-label classification

(2008) Celine Vens et al.   MACHINE LEARNING