The mutational pattern of primary lymphoma of the central nervous system determined by whole-exome sequencing

Mutational analysis of primary central nervous system lymphoma

(2015) Aurélie Bruno et al.   Oncotarget

Complex correlations: replication timing and mutational landscapes during cancer and genome evolution

(2014) Jiao Sima et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Systems biology of primary CNS lymphoma: from genetic aberrations to modeling in mice

(2013) Martina Deckert et al.   ACTA NEUROPATHOLOGICA

Frequent triple-hit expression of MYC, BCL2, and BCL6 in primary lymphoma of the central nervous system and absence of a favorable MYClowBCL2low subgroup may underlie the inferior prognosis as compared to systemic diffuse large B cell lymphomas

(2013) Anna Brunn et al.   ACTA NEUROPATHOLOGICA

Mutations in SETD2 and genes affecting histone H3K36 methylation target hemispheric high-grade gliomas

(2013) Adam M. Fontebasso et al.   ACTA NEUROPATHOLOGICA

MYC status in concert with BCL2 and BCL6 expression predicts outcome in diffuse large B-cell lymphoma

(2013) H. Horn et al.   BLOOD

Mutational and structural analysis of diffuse large B-cell lymphoma using whole-genome sequencing

(2013) R. D. Morin et al.   BLOOD

Signatures of mutational processes in human cancer

(2013) Ludmil B. Alexandrov et al.   NATURE

Recurrent somatic alterations of FGFR1 and NTRK2 in pilocytic astrocytoma

(2013) David T W Jones et al.   NATURE GENETICS

Differential effects of CXCR4-CXCL12- and CXCR7-CXCL12-mediated immune reactions on murine P0106-125-induced experimental autoimmune neuritis

(2013) A. Brunn et al.   NEUROPATHOLOGY AND APPLIED NEUROBIOLOGY

Breakpoint Features of Genomic Rearrangements in Neuroblastoma with Unbalanced Translocations and Chromothripsis

(2013) Valentina Boeva et al.   PLoS One

Genes regulating the B cell receptor pathway are recurrently mutated in primary central nervous system lymphoma

(2012) Manuel Montesinos-Rongen et al.   ACTA NEUROPATHOLOGICA

Recurrent Mutations of MYD88 and TBL1XR1 in Primary Central Nervous System Lymphomas

(2012) A. Gonzalez-Aguilar et al.   CLINICAL CANCER RESEARCH

Concurrent Expression of MYC and BCL2 in Diffuse Large B-Cell Lymphoma Treated With Rituximab Plus Cyclophosphamide, Doxorubicin, Vincristine, and Prednisone

(2012) Nathalie A. Johnson et al.   JOURNAL OF CLINICAL ONCOLOGY

Teneurin-4 Is a Novel Regulator of Oligodendrocyte Differentiation and Myelination of Small-Diameter Axons in the CNS

(2012) N. Suzuki et al.   JOURNAL OF NEUROSCIENCE

Sequencing of neuroblastoma identifies chromothripsis and defects in neuritogenesis genes

(2012) Jan J. Molenaar et al.   NATURE

Discovery and prioritization of somatic mutations in diffuse large B-cell lymphoma (DLBCL) by whole-exome sequencing

(2012) J. G. Lohr et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Activating L265P mutations of the MYD88 gene are common in primary central nervous system lymphoma

(2011) Manuel Montesinos-Rongen et al.   ACTA NEUROPATHOLOGICA

Primary Central Nervous System Lymphomas: A Validation Study of Array-Based Comparative Genomic Hybridization in Formalin-Fixed Paraffin-Embedded Tumor Specimens

(2011) E. Braggio et al.   CLINICAL CANCER RESEARCH

Modern concepts in the biology, diagnosis, differential diagnosis and treatment of primary central nervous system lymphoma

(2011) M Deckert et al.   LEUKEMIA

Frequent mutation of histone-modifying genes in non-Hodgkin lymphoma

(2011) Ryan D. Morin et al.   NATURE

Analysis of the coding genome of diffuse large B-cell lymphoma

(2011) Laura Pasqualucci et al.   NATURE GENETICS

Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4

(2011)   NATURE GENETICS

Mutations of CARD11 but not TNFAIP3 may activate the NF-κB pathway in primary CNS lymphoma

(2010) Manuel Montesinos-Rongen et al.   ACTA NEUROPATHOLOGICA

geWorkbench: an open source platform for integrative genomics

(2010) Aris Floratos et al.   BIOINFORMATICS

Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs

(2010) D. D. Jima et al.   BLOOD

Genomic profiling combined with gene expression profiling in primary central nervous system lymphoma

(2010) C. O. Sung et al.   BLOOD

The expression of teneurin-4 in the avian embryo: potential roles in patterning of the limb and nervous system

(2010) Daniela Kenzelmann-Broz et al.   INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY

Chronic active B-cell-receptor signalling in diffuse large B-cell lymphoma

(2010) R. Eric Davis et al.   NATURE

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

(2010) K. Wang et al.   NUCLEIC ACIDS RESEARCH

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Inactivating SOCS1 mutations are caused by aberrant somatic hypermutation and restricted to a subset of B-cell lymphoma entities

(2009) A. Mottok et al.   BLOOD

Recurrent Inactivation of the PRDM1 Gene in Primary Central Nervous System Lymphoma

(2009) Cornelius Courts et al.   JOURNAL OF NEUROPATHOLOGY AND EXPERIMENTAL NEUROLOGY

Chromosomal imbalances and partial uniparental disomies in primary central nervous system lymphoma

(2009) H Schwindt et al.   LEUKEMIA

Sequencing newly replicated DNA reveals widespread plasticity in human replication timing

(2009) R. S. Hansen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Pathway analysis of primary central nervous system lymphoma

(2008) H. W. Tun et al.   BLOOD

Primary lymphoma of the central nervous system: just DLBCL or not?

(2008) M. Montesinos-Rongen et al.   BLOOD

Mucosa-Associated Lymphoid Tissue Lymphoma: Novel Translocations Including Rearrangements of ODZ2, JMJD2C, and CNN3

(2008) U. Vinatzer et al.   CLINICAL CANCER RESEARCH

Del(6)(q22) andBCL6Rearrangements in Primary CNS Lymphoma Are Indicators of an Aggressive Clinical Course

(2008) Francois M. Cady et al.   JOURNAL OF CLINICAL ONCOLOGY

Genomic alterations and gene expression in primary diffuse large B-cell lymphomas of immune-privileged sites: the importance of apoptosis and immunomodulatory pathways

(2008) M Booman et al.   JOURNAL OF PATHOLOGY