Ion mobility-mass spectrometry reveals conformational flexibility in the deubiquitinating enzyme USP5

Ubiquitin code assembly and disassembly

(2014) Claire Heride et al.   CURRENT BIOLOGY

The Deubiquitinating Enzyme USP5 Modulates Neuropathic and Inflammatory Pain by Enhancing Cav3.2 Channel Activity

(2014) Agustin García-Caballero et al.   NEURON

Ubiquitin-Specific Protease 5 Is Required for the Efficient Repair of DNA Double-Strand Breaks

(2014) Satoshi Nakajima et al.   PLoS One

The structured core domain of  B-crystallin can prevent amyloid fibrillation and associated toxicity

(2014) G. K. A. Hochberg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Probing the Conformational Diversity of Cancer-Associated Mutations in p53 with Ion-Mobility Mass Spectrometry

(2013) Ewa Jurneczko et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Insights into the structure and assembly of the Bacillus subtilis clamp-loader complex and its interaction with the replicative helicase

(2013) José P. Afonso et al.   NUCLEIC ACIDS RESEARCH

The Ubiquitin Code

(2012) David Komander et al.   Annual Review of Biochemistry

Intrinsic disorder in proteins: a challenge for (un)structural biology met by ion mobility–mass spectrometry

(2012) Ewa Jurneczko et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Two ZnF-UBP Domains in Isopeptidase T (USP5)

(2012) George V. Avvakumov et al.   BIOCHEMISTRY

Detection of a Protein Conformational Equilibrium by Electrospray Ionisation-Ion Mobility-Mass Spectrometry

(2011) Matthew Jenner et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

A Grid-enabled web portal for NMR structure refinement with AMBER

(2011) Ivano Bertini et al.   BIOINFORMATICS

Mass spectrometry: come of age for structural and dynamical biology

(2011) Justin LP Benesch et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Tandem Differential Mobility Analysis-Mass Spectrometry Reveals Partial Gas-Phase Collapse of the GroEL Complex

(2011) Christopher J. Hogan et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Structural Stability from Solution to the Gas Phase: Native Solution Structure of Ubiquitin Survives Analysis in a Solvent-Free Ion Mobility–Mass Spectrometry Environment

(2011) Thomas Wyttenbach et al.   JOURNAL OF PHYSICAL CHEMISTRY B

PTBP1-dependent regulation of USP5 alternative RNA splicing plays a role in glioblastoma tumorigenesis

(2011) Daisy I. Izaguirre et al.   MOLECULAR CARCINOGENESIS

How useful is ion mobility mass spectrometry for structural biology? The relationship between protein crystal structures and their collision cross sections in the gas phase

(2010) Ewa Jurneczko et al.   ANALYST

Collision Cross Sections of Proteins and Their Complexes: A Calibration Framework and Database for Gas-Phase Structural Biology

(2010) Matthew F. Bush et al.   ANALYTICAL CHEMISTRY

Electrostatic Stabilization of a Native Protein Structure in the Gas Phase

(2010) Kathrin Breuker et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Reconstitution of the RIG-I Pathway Reveals a Signaling Role of Unanchored Polyubiquitin Chains in Innate Immunity

(2010) Wenwen Zeng et al.   CELL

Interrogating viral capsid assembly with ion mobility–mass spectrometry

(2010) Charlotte Uetrecht et al.   Nature Chemistry

I-TASSER: a unified platform for automated protein structure and function prediction

(2010) Ambrish Roy et al.   Nature Protocols

MolProbity: all-atom structure validation for macromolecular crystallography

(2009) Vincent B. Chen et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Ion mobility mass spectrometry of proteins and proteinassemblies

(2009) Charlotte Uetrecht et al.   CHEMICAL SOCIETY REVIEWS

The Effect of Calcium Ions and Peptide Ligands on the Relative Stabilities of the Calmodulin Dumbbell and Compact Structures

(2009) Thomas Wyttenbach et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Hydrophobic Protein−Ligand Interactions Preserved in the Gas Phase

(2009) Lan Liu et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Direct activation of protein kinases by unanchored polyubiquitin chains

(2009) Zong-Ping Xia et al.   NATURE

Suppression of the Deubiquitinating Enzyme USP5 Causes the Accumulation of Unanchored Polyubiquitin and the Activation of p53

(2008) Saurabh Dayal et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Recognition of Polyubiquitin Isoforms by the Multiple Ubiquitin Binding Modules of Isopeptidase T

(2008) Francisca E. Reyes-Turcu et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Ion mobility-mass spectrometry

(2008) Abu B. Kanu et al.   JOURNAL OF MASS SPECTROMETRY

Conformations of Gas-Phase Ions of Ubiquitin, Cytochrome c, Apomyoglobin, and β-Lactoglobulin Produced from Two Different Solution Conformations

(2008) P WRIGHT et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Do Ionic Charges in ESI MS Provide Useful Information on Macromolecular Structure?

(2008) I KALTASHOV et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Ion mobility–mass spectrometry analysis of large protein complexes

(2008) Brandon T Ruotolo et al.   Nature Protocols

Stepwise evolution of protein native structure with electrospray into the gas phase, 10-12 to 102 s

(2008) K. Breuker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA