Protein structure determination by conformational space annealing using NMR geometric restraints

Protein NMR Structures Refined with Rosetta Have Higher Accuracy Relative to Corresponding X-ray Crystal Structures

(2014) Binchen Mao et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Computational search for direct band gap silicon crystals

(2014) In-Ho Lee et al.   PHYSICAL REVIEW B

PDBStat: a universal restraint converter and restraint analysis software package for protein NMR

(2013) Roberto Tejero et al.   JOURNAL OF BIOMOLECULAR NMR

Protein structure modeling for CASP10 by multiple layers of global optimization

(2013) Keehyoung Joo et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

The expanded FindCore method for identification of a core atom set for assessment of protein structure prediction

(2013) David A. Snyder et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

WeNMR: Structural Biology on the Grid

(2012) Tsjerk A. Wassenaar et al.   Journal of Grid Computing

Modularity optimization by conformational space annealing

(2012) Juyong Lee et al.   PHYSICAL REVIEW E

LigDockCSA: Protein-ligand docking using conformational space annealing

(2011) Woong-Hee Shin et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

De novo protein structure prediction by dynamic fragment assembly and conformational space annealing

(2011) Juyong Lee et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Bayesian estimation of NMR restraint potential and weight: A validation on a representative set of protein structures

(2011) Aymeric Bernard et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

MolProbity: all-atom structure validation for macromolecular crystallography

(2009) Vincent B. Chen et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

TALOS+: a hybrid method for predicting protein backbone torsion angles from NMR chemical shifts

(2009) Yang Shen et al.   JOURNAL OF BIOMOLECULAR NMR

All-atom chain-building by optimizing MODELLER energy function using conformational space annealing

(2008) Keehyoung Joo et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS