Regulation of the Human Endogenous Retrovirus K (HML-2) Transcriptome by the HIV-1 Tat Protein

HIV infection reveals widespread expansion of novel centromeric human endogenous retroviruses

(2013) R. Contreras-Galindo et al.   GENOME RESEARCH

The viral oncogene Np9 acts as a critical molecular switch for co-activating β-catenin, ERK, Akt and Notch1 and promoting the growth of human leukemia stem/progenitor cells

(2013) T Chen et al.   LEUKEMIA

Human endogenous retrovirus K (HERV-K)recmRNA is expressed in primary melanoma but not in benign naevi or normal skin

(2013) Sarita Singh et al.   Pigment Cell & Melanoma Research

HERV-K–specific T cells eliminate diverse HIV-1/2 and SIV primary isolates

(2012) R. Brad Jones et al.   JOURNAL OF CLINICAL INVESTIGATION

Expression of Human Endogenous Retrovirus Type K (HML-2) Is Activated by the Tat Protein of HIV-1

(2012) M. J. Gonzalez-Hernandez et al.   JOURNAL OF VIROLOGY

The long-range interaction landscape of gene promoters

(2012) Amartya Sanyal et al.   NATURE

An integrated encyclopedia of DNA elements in the human genome

(2012)   NATURE

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Endogenous viruses: insights into viral evolution and impact on host biology

(2012) Cédric Feschotte et al.   NATURE REVIEWS GENETICS

New insight into transcription of human endogenous retroviral elements

(2012) Jan Pačes et al.   New Biotechnology

HIV infection and HERV expression: a review

(2012) Antoinette C van der Kuyl   Retrovirology

Human Endogenous Retrovirus K(HML-2) Gag- and Env-Specific T-Cell Responses Are Infrequently Detected in HIV-1-Infected Subjects Using Standard Peptide Matrix-Based Screening

(2011) R. Brad Jones et al.   Clinical and Vaccine Immunology

Characterization of Human Endogenous Retroviral Elements in the Blood of HIV-1-Infected Individuals

(2011) R. Contreras-Galindo et al.   JOURNAL OF VIROLOGY

Identification, characterization, and comparative genomic distribution of the HERV-K (HML-2) group of human endogenous retroviruses

(2011) Ravi P Subramanian et al.   Retrovirology

Activation of LTRs from Different Human Endogenous Retrovirus (HERV) Families by the HTLV-1 Tax Protein and T-Cell Activators

(2011) Chirine Toufaily et al.   Viruses-Basel

Human endogenous retroviruses and multiple sclerosis: Innocent bystanders or disease determinants?

(2010) Joseph M. Antony et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

A role for human endogenous retrovirus-K (HML-2) in rheumatoid arthritis: investigating mechanisms of pathogenesis

(2010) G. Freimanis et al.   CLINICAL AND EXPERIMENTAL IMMUNOLOGY

A Lectin Isolated from Bananas Is a Potent Inhibitor of HIV Replication

(2010) Michael D. Swanson et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Human endogenous retrovirus protein Rec interacts with the testicular zinc-finger protein and androgen receptor

(2010) S. Kaufmann et al.   JOURNAL OF GENERAL VIROLOGY

Differential expression of human endogenous retrovirus K transcripts in primary human melanocytes and melanoma cell lines after UV irradiation

(2010) Janine Reiche et al.   MELANOMA RESEARCH

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Human herpesvirus-6B induces expression of the human endogenous retrovirus K18-encoded superantigen

(2009) Vanda Lauridsen Turcanova et al.   JOURNAL OF CLINICAL VIROLOGY

HHV-6A infection induces expression of HERV-K18-encoded superantigen

(2009) Albert K. Tai et al.   JOURNAL OF CLINICAL VIROLOGY

Cross-Sectional Dating of Novel Haplotypes of HERV-K 113 and HERV-K 115 Indicate These Proviruses Originated in Africa before Homo sapiens

(2009) A. R. Jha et al.   MOLECULAR BIOLOGY AND EVOLUTION

Effects of Retroviruses on Host Genome Function

(2008) Patric Jern et al.   Annual Review of Genetics

Expression patterns of transcribed human endogenous retrovirus HERV-K(HML-2) loci in human tissues and the need for a HERV Transcriptome Project

(2008) Aline Flockerzi et al.   BMC GENOMICS

Human endogenous retrovirus HERV-K113 is capable of producing intact viral particles

(2008) K. Boller et al.   JOURNAL OF GENERAL VIROLOGY

Mobilization of Endogenous Retroviruses in Mice after Infection with an Exogenous Retrovirus

(2008) L. H. Evans et al.   JOURNAL OF VIROLOGY

Human Endogenous Retrovirus K (HML-2) Elements in the Plasma of People with Lymphoma and Breast Cancer

(2008) R. Contreras-Galindo et al.   JOURNAL OF VIROLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS