Quantifying Selection against Synonymous Mutations in HIV-1 env Evolution
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Title
Quantifying Selection against Synonymous Mutations in HIV-1 env Evolution
Authors
Keywords
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Journal
JOURNAL OF VIROLOGY
Volume 87, Issue 21, Pages 11843-11850
Publisher
American Society for Microbiology
Online
2013-08-29
DOI
10.1128/jvi.01529-13
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- FFPopSim: an efficient forward simulation package for the evolution of large populations
- (2012) Fabio Zanini et al. BIOINFORMATICS
- Ultrasensitive Allele-Specific PCR Reveals Rare Preexisting Drug-Resistant Variants and a Large Replicating Virus Population in Macaques Infected with a Simian Immunodeficiency Virus Containing Human Immunodeficiency Virus Reverse Transcriptase
- (2012) V. F. Boltz et al. JOURNAL OF VIROLOGY
- The biased nucleotide composition of the HIV genome: a constant factor in a highly variable virus
- (2012) Antoinette C van der Kuyl et al. Retrovirology
- The HIV-1 Rev response element
- (2012) Jason Fernandes et al. RNA Biology
- Early Low-Titer Neutralizing Antibodies Impede HIV-1 Replication and Select for Virus Escape
- (2012) Katharine J. Bar et al. PLoS Pathogens
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- (2011) R. A. Neher et al. GENETICS
- The Genomic Rate of Molecular Adaptation of the Human Influenza A Virus
- (2011) Samir Bhatt et al. MOLECULAR BIOLOGY AND EVOLUTION
- Estimate of effective recombination rate and average selection coefficient for HIV in chronic infection
- (2011) R. Batorsky et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Majority of CD4+ T cells from peripheral blood of HIV-1-infected individuals contain only one HIV DNA molecule
- (2011) L. Josefsson et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mapping of positive selection sites in the HIV-1 genome in the context of RNA and protein structural constraints
- (2011) Joke Snoeck et al. Retrovirology
- Nature, Position, and Frequency of Mutations Made in a Single Cycle of HIV-1 Replication
- (2010) M. E. Abram et al. JOURNAL OF VIROLOGY
- Interplay between RNA Structure and Protein Evolution in HIV-1
- (2010) R. Sanjuan et al. MOLECULAR BIOLOGY AND EVOLUTION
- Dynamics of HIV-1 Quasispecies during Antiviral Treatment Dissected Using Ultra-Deep Pyrosequencing
- (2010) Charlotte Hedskog et al. PLoS One
- Transmission of Single HIV-1 Genomes and Dynamics of Early Immune Escape Revealed by Ultra-Deep Sequencing
- (2010) Will Fischer et al. PLoS One
- Recombination Rate and Selection Strength in HIV Intra-patient Evolution
- (2010) Richard A. Neher et al. PLoS Computational Biology
- Architecture and secondary structure of an entire HIV-1 RNA genome
- (2009) Joseph M. Watts et al. NATURE
- Limited Neutralizing Antibody Specificities Drive Neutralization Escape in Early HIV-1 Subtype C Infection
- (2009) Penny L. Moore et al. PLoS Pathogens
- Autologous Neutralizing Humoral Immunity and Evolution of the Viral Envelope in the Course of Subtype B Human Immunodeficiency Virus Type 1 Infection
- (2008) E. M. Bunnik et al. JOURNAL OF VIROLOGY
- The A-rich RNA sequences of HIV-1 pol are important for the synthesis of viral cDNA
- (2008) C. P. Keating et al. NUCLEIC ACIDS RESEARCH
- Extensive purifying selection acting on synonymous sites in HIV-1 Group M sequences
- (2008) Nobubelo K Ngandu et al. Virology Journal
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