Small RNA Deep Sequencing Identifies MicroRNAs and Other Small Noncoding RNAs from Human Herpesvirus 6B

High-Resolution Profiling and Analysis of Viral and Host Small RNAs during Human Cytomegalovirus Infection

(2011) T. J. Stark et al.   JOURNAL OF VIROLOGY

A Primate Herpesvirus Uses the Integrator Complex to Generate Viral MicroRNAs

(2011) Demián Cazalla et al.   MOLECULAR CELL

miRanalyzer: an update on the detection and analysis of microRNAs in high-throughput sequencing experiments

(2011) M. Hackenberg et al.   NUCLEIC ACIDS RESEARCH

girafe - an R/Bioconductor package for functional exploration of aligned next-generation sequencing reads

(2010) J. Toedling et al.   BIOINFORMATICS

Systematic Analysis of Viral and Cellular MicroRNA Targets in Cells Latently Infected with Human γ-Herpesviruses by RISC Immunoprecipitation Assay

(2010) Lars Dölken et al.   Cell Host & Microbe

Numerous Conserved and Divergent MicroRNAs Expressed by Herpes Simplex Viruses 1 and 2

(2010) I. Jurak et al.   JOURNAL OF VIROLOGY

The DR1 and DR6 First Exons of Human Herpesvirus 6A Are Not Required for Virus Replication in Culture and Are Deleted in Virus Stocks That Replicate Well in T-Cell Lines

(2010) R. Borenstein et al.   JOURNAL OF VIROLOGY

Cytomegalovirus MicroRNA Expression Is Tissue Specific and Is Associated with Persistence

(2010) C. Meyer et al.   JOURNAL OF VIROLOGY

MicroRNA profile indicates downregulation of the TGFβ pathway in sporadic non-functioning pituitary adenomas

(2010) Henriett Butz et al.   Pituitary

The latent human herpesvirus-6A genome specifically integrates in telomeres of human chromosomes in vivo and in vitro

(2010) J. H. Arbuckle et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterization of microRNAs encoded by the bovine herpesvirus 1 genome

(2009) E. A. Glazov et al.   JOURNAL OF GENERAL VIROLOGY

Microarray-based determination of the lytic cascade of human herpesvirus 6B

(2009) E. H. Tsao et al.   JOURNAL OF GENERAL VIROLOGY

Identification of Viral MicroRNAs Expressed in Human Sacral Ganglia Latently Infected with Herpes Simplex Virus 2

(2009) J. L. Umbach et al.   JOURNAL OF VIROLOGY

Analysis of Human Alphaherpesvirus MicroRNA Expression in Latently Infected Human Trigeminal Ganglia

(2009) J. L. Umbach et al.   JOURNAL OF VIROLOGY

miRanalyzer: a microRNA detection and analysis tool for next-generation sequencing experiments

(2009) Michael Hackenberg et al.   NUCLEIC ACIDS RESEARCH

Cloning human herpes virus 6A genome into bacterial artificial chromosomes and study of DNA replication intermediates

(2009) Ronen Borenstein et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Murine Polyomavirus encodes a microRNA that cleaves early RNA transcripts but is not essential for experimental infection

(2009) Christopher S. Sullivan et al.   VIROLOGY

A toolkit for analysing large-scale plant small RNA datasets

(2008) S. Moxon et al.   BIOINFORMATICS

A single Hox locus in Drosophila produces functional microRNAs from opposite DNA strands

(2008) A. Stark et al.   GENES & DEVELOPMENT

Identification and function of human cytomegalovirus microRNAs

(2008) Finn Grey et al.   JOURNAL OF CLINICAL VIROLOGY

Novel Less-Abundant Viral MicroRNAs Encoded by Herpes Simplex Virus 2 Latency-Associated Transcript and Their Roles in Regulating ICP34.5 and ICP0 mRNAs

(2008) S. Tang et al.   JOURNAL OF VIROLOGY

MicroRNAs expressed by herpes simplex virus 1 during latent infection regulate viral mRNAs

(2008) Jennifer Lin Umbach et al.   NATURE

Discovering microRNAs from deep sequencing data using miRDeep

(2008) Marc R Friedländer et al.   NATURE BIOTECHNOLOGY

An acutely and latently expressed herpes simplex virus 2 viral microRNA inhibits expression of ICP34.5, a viral neurovirulence factor

(2008) S. Tang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA