Modelling HIV-1 2-LTR dynamics following raltegravir intensification

Modeling Uncertainty in Single-Copy Assays for HIV

(2012) R. Luo et al.   JOURNAL OF CLINICAL MICROBIOLOGY

HIV Model Parameter Estimates from Interruption Trial Data including Drug Efficacy and Reservoir Dynamics

(2012) Rutao Luo et al.   PLoS One

Absence of HIV-1 Evolution in the Gut-Associated Lymphoid Tissue from Patients on Combination Antiviral Therapy Initiated during Primary Infection

(2012) Teresa H. Evering et al.   PLoS Pathogens

Short-Course Raltegravir Intensification Does Not Increase 2 Long Terminal Repeat Episomal HIV-1 DNA in Patients on Effective Antiretroviral Therapy

(2011) G. J. Besson et al.   CLINICAL INFECTIOUS DISEASES

No Effect of Raltegravir Intensification on Viral Replication Markers in the Blood of HIV-1–Infected Patients Receiving Antiretroviral Therapy

(2011) Rajesh T. Gandhi et al.   JAIDS-JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES

Clonal Sequences Recovered from Plasma from Patients with Residual HIV-1 Viremia and on Intensified Antiretroviral Therapy Are Identical to Replicating Viral RNAs Recovered from Circulating Resting CD4+ T Cells

(2011) J. A. Anderson et al.   JOURNAL OF VIROLOGY

Rapid Turnover of 2-LTR HIV-1 DNA during Early Stage of Highly Active Antiretroviral Therapy

(2011) Weijun Zhu et al.   PLoS One

Tissue Says Blood Is Misleading, Confusing HIV Cure Efforts

(2011) J. Cohen   SCIENCE

On Identifiability of Nonlinear ODE Models and Applications in Viral Dynamics

(2011) Hongyu Miao et al.   SIAM REVIEW

Deep Molecular Characterization of HIV-1 Dynamics under Suppressive HAART

(2011) Maria J. Buzón et al.   PLoS Pathogens

Episomal Viral cDNAs Identify a Reservoir That Fuels Viral Rebound after Treatment Interruption and That Contributes to Treatment Failure

(2011) Mark Sharkey et al.   PLoS Pathogens

Effect of raltegravir-containing intensification on HIV burden and T-cell activation in multiple gut sites of HIV-positive adults on suppressive antiretroviral therapy

(2010) Steven A Yukl et al.   AIDS

Evidence of persistent low-level viremia in long-term HAART-suppressed, HIV-infected individuals

(2010) Hiroyu Hatano et al.   AIDS

Hierarchical Bayesian inference for HIV dynamic differential equation models incorporating multiple treatment factors

(2010) Yangxin Huang et al.   BIOMETRICAL JOURNAL

Short‐Course Raltegravir Intensification Does Not Reduce Persistent Low‐Level Viremia in Patients with HIV‐1 Suppression during Receipt of Combination Antiretroviral Therapy

(2010) D. McMahon et al.   CLINICAL INFECTIOUS DISEASES

Can HIV infection be eradicated through use of potent antiviral agents?

(2010) Lina Josefsson et al.   CURRENT OPINION IN INFECTIOUS DISEASES

Evolution of 2-long terminal repeat (2-LTR) episomal HIV-1 DNA in raltegravir-treated patients and in in vitro infected cells

(2010) Sandrine Reigadas et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

HIV-1 replication and immune dynamics are affected by raltegravir intensification of HAART-suppressed subjects

(2010) Maria J Buzón et al.   NATURE MEDICINE

HIV Persistence and the Prospect of Long-Term Drug-Free Remissions for HIV-Infected Individuals

(2010) D. Trono et al.   SCIENCE

Quantitative PCR used to Assess HIV-1 Integration and 2-LTR Circle Formation in Human Macrophages, Peripheral Blood Lymphocytes and a CD4+ Cell Line

(2010) Brian Friedrich et al.   Virology Journal

Biomarkers of HIV replication

(2010) Janet D Siliciano et al.   Current Opinion in HIV and AIDS

Targeting viral reservoirs: ability of antiretroviral therapy to stop viral replication

(2010) Frank Maldarelli   Current Opinion in HIV and AIDS

Variation in protein levels obtained from human blood cells and biofluids for platelet, peripheral blood mononuclear cell, plasma, urine and saliva proteomics

(2009) L. Katie Crosley et al.   Genes and Nutrition

Treatment intensification does not reduce residual HIV-1 viremia in patients on highly active antiretroviral therapy

(2009) J. B. Dinoso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Differential Equation Modeling of HIV Viral Fitness Experiments: Model Identification, Model Selection, and Multimodel Inference

(2008) Hongyu Miao et al.   BIOMETRICS

Quantification of mRNA in single cells and modelling of RT-qPCR induced noise

(2008) Martin Bengtsson et al.   BMC MOLECULAR BIOLOGY

Parameter Identifiability and Estimation of HIV/AIDS Dynamic Models

(2008) Hulin Wu et al.   BULLETIN OF MATHEMATICAL BIOLOGY