You're one in a googol: optimizing genes for protein expression

Natural computation meta-heuristics for the in silico optimization of microbial strains

(2008) Miguel Rocha et al.   BMC BIOINFORMATICS

OptCircuit: an optimization based method for computational design of genetic circuits

(2008) Madhukar S Dasika et al.   BMC Systems Biology

Comparison of Correspondence Analysis Methods for Synonymous Codon Usage in Bacteria

(2008) H. Suzuki et al.   DNA RESEARCH

Synonymous Mutations and Ribosome Stalling Can Lead to Altered Folding Pathways and Distinct Minima

(2008) Chung-Jung Tsai et al.   JOURNAL OF MOLECULAR BIOLOGY

Mutation-Selection Models of Codon Substitution and Their Use to Estimate Selective Strengths on Codon Usage

(2008) Z. Yang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Following translation by single ribosomes one codon at a time

(2008) Jin-Der Wen et al.   NATURE

Heterologous Protein Expression Is Enhanced by Harmonizing the Codon Usage Frequencies of the Target Gene with those of the Expression Host

(2008) Evelina Angov et al.   PLoS One

Highly Conserved Regimes of Neighbor-Base-Dependent Mutation Generated the Background Primary-Structural Heterogeneities along Vertebrate Chromosomes

(2008) Marcos A. Antezana et al.   PLoS One

Frameshift events associated with the lysyl-tRNA and the rare arginine codon, AGA, in Escherichia coli: A case study involving the human Relaxin 2 protein

(2008) John J. Kerrigan et al.   PROTEIN EXPRESSION AND PURIFICATION

Codon optimization can improve expression of human genes in Escherichia coli: A multi-gene study

(2008) Nicola A. Burgess-Brown et al.   PROTEIN EXPRESSION AND PURIFICATION