Sparse Additive Ordinary Differential Equations for Dynamic Gene Regulatory Network Modeling

Numerical Discretization-Based Estimation Methods for Ordinary Differential Equation Models via Penalized Spline Smoothing with Applications in Biomedical Research

(2012) Hulin Wu et al.   BIOMETRICS

Parameter estimation of kinetic models from metabolic profiles: two-phase dynamic decoupling method

(2011) Gengjie Jia et al.   BIOINFORMATICS

High-Dimensional ODEs Coupled With Mixed-Effects Modeling Techniques for Dynamic Gene Regulatory Network Identification

(2011) Tao Lu et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

Variable selection in additive models by non-negative garrote

(2011) Eva Cantoni et al.   STATISTICAL MODELLING

Estimating time-varying networks

(2010) Mladen Kolar et al.   Annals of Applied Statistics

Sieve estimation of constant and time-varying coefficients in nonlinear ordinary differential equation models by considering both numerical error and measurement error

(2010) Hongqi Xue et al.   ANNALS OF STATISTICS

Variable selection in nonparametric additive models

(2010) Jian Huang et al.   ANNALS OF STATISTICS

Consistent group selection in high-dimensional linear regression

(2010) Fengrong Wei et al.   BERNOULLI

Variable Selection Using Adaptive Nonlinear Interaction Structures in High Dimensions

(2010) Peter Radchenko et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

High-dimensional additive modeling

(2009) Lukas Meier et al.   ANNALS OF STATISTICS

Asymptotic efficiency and finite-sample properties of the generalized profiling estimation of parameters in ordinary differential equations

(2009) Xin Qi et al.   ANNALS OF STATISTICS

Asymptotic properties of penalized spline estimators

(2009) G. Claeskens et al.   BIOMETRIKA

Recursive regularization for inferring gene networks from time-course gene expression profiles

(2009) Teppei Shimamura et al.   BMC Systems Biology

Origins and Mechanisms of miRNAs and siRNAs

(2009) Richard W. Carthew et al.   CELL

Analysis of Gene Sets Based on the Underlying Regulatory Network

(2009) Ali Shojaie et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Parameter Estimation for Differential Equation Models Using a Framework of Measurement Error in Regression Models

(2009) Hua Liang et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

Sparse additive models

(2009) Pradeep Ravikumar et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY

INFERENCE OF LARGE-SCALE GENE REGULATORY NETWORKS USING REGRESSION-BASED NETWORK APPROACH

(2009) HASEONG KIM et al.   Journal of Bioinformatics and Computational Biology

Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models

(2008) Osamu Hirose et al.   BIOINFORMATICS

On the asymptotics of penalized splines

(2008) Y. Li et al.   BIOMETRIKA

Extended Bayesian information criteria for model selection with large model spaces

(2008) J. Chen et al.   BIOMETRIKA

Gene regulatory network inference: Data integration in dynamic models—A review

(2008) Michael Hecker et al.   BIOSYSTEMS

A note on adaptive group lasso

(2008) Hansheng Wang et al.   COMPUTATIONAL STATISTICS & DATA ANALYSIS

Selecting optimal weighting factors in iPDA for parameter estimation in continuous-time dynamic models

(2008) M.S. Varziri et al.   COMPUTERS & CHEMICAL ENGINEERING

Efficient Local Estimation for Time-Varying Coefficients in Deterministic Dynamic Models With Applications to HIV-1 Dynamics

(2008) Jianwei Chen et al.   JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION

Boolean network models of cellular regulation: prospects and limitations

(2008) S. Bornholdt   Journal of the Royal Society Interface

Parameter estimation of ODE’s via nonparametric estimators

(2008) Nicolas J-B. Brunel   Electronic Journal of Statistics