Evaluation of Normalization Methods on GeLC-MS/MS Label-Free Spectral Counting Data to Correct for Variation during Proteomic Workflows

Improving Proteome Coverage on a LTQ-Orbitrap Using Design of Experiments

(2011) Genna L. Andrews et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Analysis of the myosin-II-responsive focal adhesion proteome reveals a role for β-Pix in negative regulation of focal adhesion maturation

(2011) Jean-Cheng Kuo et al.   NATURE CELL BIOLOGY

Comparison of stable-isotope labeling with amino acids in cell culture and spectral counting for relative quantification of protein expression

(2011) Timothy S. Collier et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Direct Comparison of Stable Isotope Labeling by Amino Acids in Cell Culture and Spectral Counting for Quantitative Proteomics

(2010) Timothy S. Collier et al.   ANALYTICAL CHEMISTRY

Analyzing marginal cases in differential shotgun proteomics

(2010) Paulo C. Carvalho et al.   BIOINFORMATICS

Role of spectral counting in quantitative proteomics

(2010) Deborah H Lundgren et al.   Expert Review of Proteomics

Quantitative Proteome and Transcriptome Analysis of the ArchaeonThermoplasma acidophilumCultured under Aerobic and Anaerobic Conditions

(2010) Na Sun et al.   JOURNAL OF PROTEOME RESEARCH

Relative, label-free protein quantitation: Spectral counting error statistics from nine replicate MudPIT samples

(2010) Bret Cooper et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Differential metabolic response of cultured rice (Oryza sativa) cells exposed to high- and low-temperature stress

(2010) Chumithri Gayani Gammulla et al.   PROTEOMICS

Coupling of a vented column with splitless nanoRPLC-ESI-MS for the improved separation and detection of brain natriuretic peptide-32 and its proteolytic peptides

(2009) Genna L. Andrews et al.   JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES

Label-free Quantitative Analysis of One-dimensional PAGE LC/MS/MS Proteome

(2008) Ben-Bo Gao et al.   MOLECULAR & CELLULAR PROTEOMICS

Probabilistic assembly of human protein interaction networks from label-free quantitative proteomics

(2008) M. E. Sardiu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA