4.8 Article

Crystalline Arrays of Pairs of Molecular Rotors: Correlated Motion, Rotational Barriers, and Space-Inversion Symmetry Breaking Due to Conformational Mutations

Journal

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
Volume 135, Issue 25, Pages 9366-9376

Publisher

AMER CHEMICAL SOC
DOI: 10.1021/ja4044517

Keywords

-

Funding

  1. CNRS
  2. Region des Pays de la Loire Grant MOVAMOL
  3. CNRS-Russian Federation [PICS 6028, RFBR-CNRS 12-03-91059]
  4. Spanish Ministeriode Economia y Competitividad [FIS2012-37549-C05-05, FIS2009-1271-C04-03, CTQ2011-29054-C02-01, CSD 2007-00041]
  5. ERC [227756]
  6. Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic [RVO: 61388963]
  7. U.S. National Foundation grant [CHE 0848663]
  8. European Research Council (ERC) [227756] Funding Source: European Research Council (ERC)

Ask authors/readers for more resources

The rod-like molecule bis 4-(4-pyridyl)ethynyl)bicyclo[2.2.2]oct-1-yl)buta-1,3-diyne, 1, contains two 1,4-bis(ethynyl)bicyclo[2.2.2]octane (ethynyl) chiral rotators linked by a diyne fragment and self assembles in a one-dimensional, monoclinic C2/c centrosymmetric structure where two equilibrium positions with large occupancy imbalance (88% versus 12%) are identified on a single rotor site Combining variable temperature (70-300 K) proton spin-lattice relaxation, H-1 T-1(-1), at two different H-1 Larmor frequencies (55 and 210 MHz) and DFT calculations of rotational barriers, we were able to assign two types of Brownian rotators with different activation energies, 1.85 and 6.1 kcal mol(-1), to the two H-1 spin-lattice relaxation processes on the single rotor site. On the basis of DFT calculations, the low-energy process has been assigned to adjacent rotors in a well-correlated synchronous motion, whereas the high-energy process is the manifestation of an abrupt change in their kinematics once two blades of adjacent rotors are seen to rub together. Although crystals of 1 should be second harmonic inactive, a large second-order optical response is recorded when the electric field oscillates in a direction parallel to the unique rotor axle director. We conclude that conformational mutations by torsional interconversion of the three blades of the BCO units break space-inversion symmetry in sequences of mutamers in dynamic equilibrium in the crystal in domains at a rnesoscopic scale comparable with the wavelength of light used A control experiment was performed with a crystalline film of a similar tetrayne molecule, 1,4-bis(3-((trimethylsilyl)ethynyl)bicyclo-[1.1.1]pent-1-yObuta-1,3-diyne, whose bic-ydopentane units can rotate but are achiral and produce no second-order optical response.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.8
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Chemistry, Multidisciplinary

Benchmark Dynamics of Dipolar Molecular Rotors in Fluorinated Metal-Organic Frameworks

Jacopo Perego, Charl X. Bezuidenhout, Silvia Bracco, Sergio Piva, Giacomo Prando, Cristian Aloisi, Pietro Carretta, Jiri Kaleta, Thi Phuong Le, Piero Sozzani, Andrea Daolio, Angiolina Comotti

Summary: Fluorinated metal-organic frameworks exhibit benchmark mobility of correlated dipolar rotors at low temperatures, with practically zero activation energy. Through various experiments and calculations, the dynamic characteristics and cascade mechanism of dipole configurations have been revealed. It has also been shown that the dipole configurations in the crystal can be changed by chemical stimuli such as CO2.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2023)

Article Chemistry, Inorganic & Nuclear

First crystal structure of an Fe(iii) anionic complex based on a pyruvic acid thiosemicarbazone ligand with Li+: synthesis, features of magnetic behavior and theoretical analysis

Maxim A. Blagov, Nataliya G. Spitsyna, Nikolai S. Ovanesyan, Anatolii S. Lobach, Leokadiya V. Zorina, Sergey V. Simonov, Konstantin V. Zakharov, Alexander N. Vasiliev

Summary: A new iron(III) anionic complex based on a pyruvic acid thiosemicarbazone ligand has been synthesized and characterized. The compound exhibits a spin-crossover transition from the low-spin to the high-spin state above 250 K. It was also found that the lithium cation has an influence on the stabilization of the low-spin state.

DALTON TRANSACTIONS (2023)

Article Chemistry, Organic

Chlorinated Cubane-1,4-dicarboxylic Acids

Adela Krizkova, Guillaume Bastien, Igor Roncevic, Ivana Cisarova, Jiri Rybacek, Vaclav Kasicka, Jiri Kaleta

Summary: In this study, a radical chlorination reaction of cubane-1,4-dicarboxylic acid was reported, resulting in the preferential formation of a monochlorinated derivative (approximately 70%) along with four dichlorinated derivatives (approximately 20% in total). The positions of the chlorine atoms were confirmed by X-ray diffraction analysis. The acidity constants of the different chlorinated cubane dicarboxylates were determined, and their thermal stability was evaluated using differential scanning calorimetry. The reaction pathways and strain energies of the derivatives were investigated through computational calculations.

JOURNAL OF ORGANIC CHEMISTRY (2023)

Article Chemistry, Inorganic & Nuclear

Synthesis and crystal growth of novel layered bismuthides ATM2Bi2 (A=K, Rb, Cs; TM=Zn, Cd), electron-deficient compounds with the ThCr2Si2 structure

Andrey I. Shilov, Kirill S. Pervakov, Konstantin A. Lyssenko, Vladimir A. Vlasenko, Dmitri V. Efremov, Saicharan Aswartham, Sergey V. Simonov, Igor V. Morozov, Andrei V. Shevelkov

Summary: We have grown and characterized four new ternary layered bismuthides, KZn2Bi2 (I), RbZn2Bi2 (II), RbCd2Bi2 (III), and CsCd2Bi2 (IV), which belong to the 122 family of compounds. Single crystals obtained by self-flux technique were analyzed using a combination of powder X-ray diffraction, scanning electron microscopy, energy-dispersive X-ray spectroscopy, and single crystal X-ray diffraction. All compounds crystallize in the layered ThCr2Si2 structure and have a plate-like morphology with weak bonding between layers. A significant structural difference between ACd(2)Bi(2) and AZn(2)Bi(2) is observed and discussed.

ZEITSCHRIFT FUR ANORGANISCHE UND ALLGEMEINE CHEMIE (2023)

Article Chemistry, Medicinal

Tuning the photophysical and chiroptical properties of [4]helicene-diketopyrrolopyrroles

Maurizio Mastropasqua Talamo, Thomas Cauchy, Francesco Zinna, Flavia Pop, Narcis Avarvari

Summary: This study reports the synthesis and functionalization of diketopyrrolo[3,4-c]pyrrole (DPP) derivatives containing chiral groups. Four bis([4]helicene)-DPP and bis([4]thiahelicene)-DPP dyes were prepared by condensation and N-alkylation reactions. Compound 12, with sec-phenylethyl groups attached to the nitrogen atoms, was obtained as enantiomers. The chiroptical properties of compound 12 indicate a strong chiral perturbation despite the stereodynamic nature of the flanking units.

CHIRALITY (2023)

Article Chemistry, Inorganic & Nuclear

Mixed-Valence Conductors from Ni Bis(diselenolene) Complexes with a Thiazoline Backbone

Hadi Hachem, HengBo Cui, Reizo Kato, Pere Alemany, Enric Canadell, Olivier Jeannin, Marc Fourmigue, Dominique Lorcy

Summary: Highly conducting, mixed-valence, multi-component nickel bis-(diselenolene) salts were obtained by electrocrystallization. Depending on the counter ion used, the salts showed different stoichiometries of 1:2 and 1:3. This is a rare example of mixed-valence conducting salts of nickel diselenolene complexes, which usually form single component neutral species. The transport measurements under high pressure and band structure calculations confirmed the semiconducting and quasi metallic characters of the salts.

INORGANIC CHEMISTRY (2023)

Article Chemistry, Organic

Phenyl-Substituted Cibalackrot Derivatives: Synthesis, Structure, and Solution Photophysics

Jiri Kaleta, Miroslav Dudic, Lucie Ludvikova, Alan Liska, Alexandr Zaykov, Igor Roncevic, Milan Masat, Lucie Bednarova, Paul I. Dron, Simon J. Teat, Josef Michl

Summary: Three symmetrically and three unsymmetrically substituted cibalackrot dyes have been synthesized and studied for their potential use in molecular electronics and singlet fission. Solution measurements and computational analysis revealed the molecular properties to be close to ideal for singlet fission. However, the crystal structures obtained through XRD showed competition from charge separation, intersystem crossing, and excimer formation. Calculations indicated the difficulty of changing the crystal packing in a desirable direction. Preparation of deuteriated versions of the dyes was also discussed to further investigate the mechanism of fast intersystem crossing.

JOURNAL OF ORGANIC CHEMISTRY (2023)

Article Chemistry, Physical

Chirality Effects and Semiconductor versus Metallic Nature in Halide Nanotubes

Costanza Borghesi, Giacomo Tanzi Marlotti, Enric Canadell, Giacomo Giorgi, Riccardo Rurali

Summary: A density functional theory study was conducted to investigate the electronic structure of nanostructures based on hexagonal layers of LuI3. Both bulk and layered structures demonstrated large and indirect bandgaps. Various nanotubes with different chiralities were generated from these layers. The chirality-dependent nature of the optical gaps was rationalized through band folding arguments. The discovery of metastable armchair LuI3 nanotubes with dimerized iodine chains offers potential for the generation of neutral Lu2NI5N nanotubes with interesting magnetic behavior.

JOURNAL OF PHYSICAL CHEMISTRY C (2023)

Article Chemistry, Multidisciplinary

Metastable Polymorphic Phases in Monolayer TaTe2

Iolanda Di Bernardo, Joan Ripoll-Sau, Jose Angel Silva-Guillen, Fabian Calleja, Cosme G. Ayani, Rodolfo Miranda, Enric Canadell, Manuela Garnica, Amadeo L. Vazquez L. de Parga

Summary: This study uses scanning tunneling microscopy (STM) to investigate MBE-grown monolayer (ML) TaTe2, and reports the first observation of the coexistence of 1H polymorphic phase and 1T phase, with their relative coverage controlled by adjusting synthesis parameters. Several superperiodic structures compatible with CDWs are observed on the 1T phase. The study provides theoretical insight into the stability of different phases, determined by the balance of Te-Ta and Te-Te interactions.

SMALL (2023)

Article Chemistry, Inorganic & Nuclear

Benzothiadiazolyl-pyridine and-2,2′-bipyridine Ligands for Luminescent and Magnetic Complexes

Nataliya Plyuta, Thomas Cauchy, Miguel Julve, Narcis Avarvari

Summary: Two new luminescent ligands were successfully synthesized through Suzuki coupling reactions. DFT and TD-DFT calculations were performed to analyze the UV-visible and emission bands. The experimental results revealed the coordination modes and structural characteristics of the ligands with metal ions. The products showed strong luminescence properties in solution and the solid state, and magnetic studies indicated small antiferromagnetic interactions in some of the compounds.

EUROPEAN JOURNAL OF INORGANIC CHEMISTRY (2023)

Article Chemistry, Organic

Two Squares in a Barrel: An Axially Disubstituted Conformationally Rigid Aliphatic Binding Motif for Cucurbit[6]uril

Kristyna Jelinkova, Aneta Zavodna, Jiri Kaleta, Petr Janovsky, Filip Zatloukal, Marek Necas, Zdenka Pruckova, Lenka Dastychova, Michal Rouchal, Robert Vicha

Summary: Novel binding motifs suitable for the construction of multitopic molecular devices are needed in supramolecular chemistry. In this study, we prepared three model guests and investigated their binding properties towards cucurbit[6]uril (CB6)/7 and alpha-/beta-CD. The new binding motifs showed high selectivity and stability, indicating promising potential in the construction of multitopic supramolecular components.

JOURNAL OF ORGANIC CHEMISTRY (2023)

Article Chemistry, Multidisciplinary

Chalcogen bonding and variable charge transfer degree in two polymorphs of 1: 1 conducting salts with segregated stacks

Maxime Beau, Olivier Jeannin, Marc Fourmigue, Pascale Auban-Senzier, Claude Pasquier, Pere Alemany, Enric Canadell, Ie-Rang Jeon

Summary: Using a bis(selenomethyl)tetrathiafulvalene (TTF) derivative as a donor and chalcogen bonding (ChB) interactions, charge transfer (CT) salts with unique packing structures were achieved. Two polymorphs of 1:1 CT salts were obtained by reacting EDT-TTF(SeMe)(2) with 2,5-difluoro-7,7,8,8-tetracyanoquinodimethane (F(2)TCNQ). The unique packing structures resulted in different electrical properties, with the alpha-salt showing semiconducting behavior and the beta-salt exhibiting a two-step metal-to-insulator transition with a higher transition temperature than other CT salts.

CRYSTENGCOMM (2023)

Article Materials Science, Multidisciplinary

Chiral diketopyrrolopyrrole dyes showing light emission in solid and aggregate states

Maurizio Mastropasqua Talamo, Thomas Cauchy, Flavia Pop, Francesco Zinna, Lorenzo Di Bari, Narcis Avarvari

Summary: In this work, the aggregation-enhanced emission (AEE) and circularly polarised light (CPL) emission of achiral and chiral DPPs appended with tetraarylethylene units have been studied. It was found that some chiral DPPs exhibited excellent emissive properties in the solid state by suppressing aggregation-caused quenching, while achiral DPPs showed classical ACQ behavior. Furthermore, the chiroptical properties of DPPs can be enhanced by introducing N-sec-phenethyl groups.

JOURNAL OF MATERIALS CHEMISTRY C (2023)

Article Chemistry, Multidisciplinary

Dimerization reactions with oxidized brominated thiophenes

Khaled Youssef, Magali Allain, Thomas Cauchy, Frederic Gohier

Summary: 2-Bromo, 3-bromothiophene, 2,5-dibromothiophene, 3,4-dibromothiophene, and perbrominated thiophene were oxidized under different conditions to form thiophene S,S-dioxide. Depending on the substitution, sulfone was obtained when the hindered thiophene was used. However, monosubstituted thiophenes could not be transformed into sulfone due to the reactivity of the sulfoxide intermediate, which led to dimerization. The structures were confirmed through the obtaining of crystals. The oxidation of 3,4-dibromothiophene could either result in the formation of cycloadduct or the isolation of sulfone, which could further evolve into benzothiophene sulfone.

NEW JOURNAL OF CHEMISTRY (2023)

Article Chemistry, Multidisciplinary

Regular arrays of C60-based molecular rotors mounted on the surface of tris(o-phenylenedioxy)cyclotriphosphazene nanocrystals

Carina Santos Hurtado, Guillaume Bastien, Igor Roncevic, Martin Dracinsky, Teddy Tortorici, Charles T. Rogers, Josef Michl, Jiri Kaleta

Summary: Dielectric spectroscopy was employed to calculate the barriers of rotation for surface-mounted fullerenes. A C-60 derivative with an anchoring group was synthesized to form a surface inclusion with TPP. Solid-state NMR analysis revealed different chemical environments for approximately 50% of the surface-mounted molecules, indicating two distinct insertion modes.

CHEMICAL COMMUNICATIONS (2023)

No Data Available