Diversity of Marine-Derived Fungal Cultures Exposed by DNA Barcodes: The Algorithm Matters

Fungi ahoy! Diversity on marine wooden substrata in the high North

(2014) Teppo Rämä et al.   Fungal Ecology

Combining morphometrics with molecular taxonomy: How different are similar foliose keratose sponges from the Australian tropics?

(2014) M.A. Abdul Wahab et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Marine natural products

(2014) John W. Blunt et al.   NATURAL PRODUCT REPORTS

Improved Selection of Internal Transcribed Spacer-Specific Primers Enables Quantitative, Ultra-High-Throughput Profiling of Fungal Communities

(2013) Nicholas A. Bokulich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Alignment-free analysis of barcode sequences by means of compression-based methods

(2013) Massimo La Rosa et al.   BMC BIOINFORMATICS

Phylogeny Drives Large Scale Patterns in Australian Marine Bioactivity and Provides a New Chemical Ecology Rationale for Future Biodiscovery

(2013) Elizabeth A. Evans-Illidge et al.   PLoS One

Lessons from the Past and Charting the Future of Marine Natural Products Drug Discovery and Chemical Biology

(2012) William H. Gerwick et al.   CHEMISTRY & BIOLOGY

Intra-annual variation in turbidity in response to terrestrial runoff on near-shore coral reefs of the Great Barrier Reef

(2012) Katharina E. Fabricius et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Large-scale species delimitation method for hyperdiverse groups

(2012) N. PUILLANDRE et al.   MOLECULAR ECOLOGY

Cryptic diversity in flathead fishes (Scorpaeniformes: Platycephalidae) across the Indo-West Pacific uncovered by DNA barcoding

(2012) Melody Puckridge et al.   Molecular Ecology Resources

Phylogenetic relationships among the Caribbean members of the Cliona viridis complex (Porifera, Demospongiae, Hadromerida) using nuclear and mitochondrial DNA sequences

(2012) Dairo Escobar et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

(2012) C. L. Schoch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Analytical techniques for discovery of bioactive compounds from marine fungi

(2012) Katia Duarte et al.   TRAC-TRENDS IN ANALYTICAL CHEMISTRY

Marine Fungi: Their Ecology and Molecular Diversity

(2011) Thomas A. Richards et al.   Annual Review of Marine Science

Suspended sediment grain size and mineralogy across the continental shelf of the Great Barrier Reef: Impacts on the physiology of a coral reef sponge

(2011) R.J. Bannister et al.   CONTINENTAL SHELF RESEARCH

Phylogenetic Identification of Fungi Isolated from the Marine Sponge Tethya aurantium and Identification of Their Secondary Metabolites

(2011) Jutta Wiese et al.   Marine Drugs

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

ABGD, Automatic Barcode Gap Discovery for primary species delimitation

(2011) N. PUILLANDRE et al.   MOLECULAR ECOLOGY

ITS as an environmental DNA barcode for fungi: an in silico approach reveals potential PCR biases

(2010) Eva Bellemain et al.   BMC MICROBIOLOGY

Yeast biodiversity from oleic ecosystems: Study of their biotechnological properties

(2010) Sheila Romo-Sánchez et al.   FOOD MICROBIOLOGY

Functional genomic signatures of sponge bacteria reveal unique and shared features of symbiosis

(2010) Torsten Thomas et al.   ISME Journal

Marine Drugs from Sponge-Microbe Association—A Review

(2010) Tresa Remya A. Thomas et al.   Marine Drugs

Environmental Barcoding Reveals Massive Dinoflagellate Diversity in Marine Environments

(2010) Rowena F. Stern et al.   PLoS One

The Effects of Alignment Quality, Distance Calculation Method, Sequence Filtering, and Region on the Analysis of 16S rRNA Gene-Based Studies

(2010) Patrick D. Schloss   PLoS Computational Biology

The ITS region as a target for characterization of fungal communities using emerging sequencing technologies

(2009) Rolf Henrik Nilsson et al.   FEMS MICROBIOLOGY LETTERS

Broad-Spectrum Antimicrobial Epiphytic and Endophytic Fungi from Marine Organisms: Isolation, Bioassay and Taxonomy

(2009) Yi Zhang et al.   Marine Drugs

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity

(2009) M. Buée et al.   NEW PHYTOLOGIST

Accelerated Species Inventory on Madagascar Using Coalescent-Based Models of Species Delineation

(2009) Michael T. Monaghan et al.   SYSTEMATIC BIOLOGY

Improving accuracy of multiple sequence alignment algorithms based on alignment of neighboring residues

(2008) Yue Lu et al.   NUCLEIC ACIDS RESEARCH

Testing the Reliability of Genetic Methods of Species Identification via Simulation

(2008) Howard A. Ross et al.   SYSTEMATIC BIOLOGY