Article
Soil Science
Tianli Bao, Xiaoguang Jiao, Xueqin Yang, Mingxiang Xu, Wen Li, Yu Qiao, Liqian Gao, Yunge Zhao
Summary: The study demonstrates that the microbial community structure in biocrusts can be improved and sustained over the long term under moderate disturbance. This improvement is associated with changes in cyanobacterial biomass, available N, soil moisture, vegetation coverage, and the C/N ratio.
Article
Forestry
Zhuanzhuan Sun, Peilei Hu, Wei Zhang, Dan Xiao, Dongsheng Zou, Yingying Ye, Kelin Wang
Summary: This study compared managed and natural vegetation restorations and found that both types can increase soil microbial community abundance, although it still falls short of the abundance found in mature forests. Soil organic carbon and total nitrogen were identified as the primary factors influencing microbial abundance, while mean annual temperature was recognized as the primary factor contributing to variation in microbial community structure.
Article
Soil Science
Ernest D. Osborn, Steven G. McBride, Joseph V. Kupper, Jim A. Nelson, David H. McNear, Rebecca L. McCulley, J. E. Barrett
Summary: Different methods were used to assess microbial responses to land use change and drought-rewetting in this study. The results showed that the responses detected by different methods were qualitatively different, indicating the importance of using multiple methodological approaches to fully understand microbial community responses to global change.
SOIL BIOLOGY & BIOCHEMISTRY
(2022)
Article
Geosciences, Multidisciplinary
Long Huang, Weikai Bao, Hui Hu, David M. Eissenstat, Fanglan Li
Summary: Soil microbial communities are influenced by soil properties, and the effect of rock fragment content (RFC) on these communities is poorly understood in arid ecosystems. The experiment examined the responses of soil microbial biomass and communities to RFC gradients and planting treatments. Results showed that high RFC inhibited soil microbial development, but plants promoted microbial biomass in high RFC by improving soil properties. Soil water content and nutrient levels were important factors influencing soil microbial communities.
Article
Forestry
Hongrong Guo, Fuzhong Wu, Xiaoyue Zhang, Wentao Wei, Ling Zhu, Ruobing Wu, Dingyi Wang
Summary: The differences between aquatic and terrestrial habitats can impact microbial community composition and litter decomposition. This study found that habitat type affects the composition of microbial communities and influences the rate of litter decomposition. Interestingly, the microbial community showed the greatest correlation with the decomposition rate of litter in streams.
Article
Soil Science
Tinghui Yang, Xiaojuan Li, Bin Hu, Dandan Wei, Zilong Wang, Weikai Bao
Summary: This study investigated the latitudinal patterns of soil microbial biomass and community composition in arid valleys of southwest China. The results showed that soil microbial biomass increased with latitude, while specific microbial groups were influenced by vegetation properties and soil nutrients. Climate, vegetation, and soil properties were identified as crucial drivers of changes in soil microbial communities with latitude.
Article
Ecology
Zheng-Jun Guan, Wei Wei, C. Neal Stewart, Zhi-Xi Tang
Summary: A two-year field experiment on Bt transgenic oilseed rape demonstrated that there were significant changes in the rhizosphere soil microbial community structure and diversity, particularly in relation to developmental stage, diversity, and evenness. The study showed that different transgenic lines might have a minor impact on soil microbial structure, with variations seen in consecutive seasons and at different growth stages.
EUROPEAN JOURNAL OF SOIL BIOLOGY
(2021)
Article
Soil Science
Jungang Chen, Biao Zhu, Yunhai Zhang
Summary: The overuse of antibiotics has caused serious concerns worldwide as it may lead to significant changes in soil microbial communities, thereby threatening soil ecosystems. However, the effects of antibiotics on soil microbial biomass and community structure on a global scale are still unclear. Using 66 paired observations, we conducted one of the first global meta-analyses to evaluate the effects of various antibiotics on soil microbial communities and explore the underlying mechanisms. Our findings show that antibiotics suppressed soil microbial biomass, bacterial biomass, and fungal biomass, with the ratio of bacteria to fungi biomass decreasing for all antibiotic types. The negative effects of antibiotics on soil microbial community and bacteria biomass diminished over time, and the response of bacteria biomass to antibiotics varied with latitude, regulated by temperature, precipitation, soil pH, and total nitrogen.
APPLIED SOIL ECOLOGY
(2023)
Article
Soil Science
Jun Li, Chenhui Chang, Wanqin Yang
Summary: The study revealed significant variations in the interactions between invertebrates and microbes in decomposing litter with seasonal rainfall and tree species. Invertebrate exclusion had differential effects on bacterial and fungal biomass, as well as mass loss rate of litter. This highlights the complex relationships between invertebrates and microbes in the litter decomposition process.
APPLIED SOIL ECOLOGY
(2022)
Article
Soil Science
A. Barreiro, A. Fox, M. Jongen, J. Melo, M. Musyoki, A. Vieira, J. Zimmermann, G. Carlsson, C. Cruz, A. Luscher, F. Rasche, L. Silva, F. Widmer, L. M. Dimitrova Martensson
Summary: This study, which investigates grassland soil microbial communities along a pan-European agro-ecological gradient, shows that environmental properties have the most significant impact on soil bacterial community structure, while soil fungal groups are more responsive to grassland management intensity.
APPLIED SOIL ECOLOGY
(2022)
Article
Environmental Sciences
Rudong Zhao, Mei He, Canlan Jiang, Feng Liu
Summary: This study investigated the response of soil microbial community structure and stoichiometry to long-term land-use change in forests. The results showed that soil microbial stoichiometry had strict homeostasis regardless of soil depth, and the microbial community structure was mainly driven by environmental factors at different depths.
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH
(2022)
Article
Environmental Sciences
Hongyang Pan, Kai Zhang, Sisi Chen, Ruotong Wu, Fuqiang Song, Wei Chang, Xiaoxu Fan
Summary: Due to the complex pore systems and chemical substances, soil aggregates provide a heterogeneous microenvironment for adsorption capacity and microbial survival. This study investigated the adsorption behavior of atrazine and microbial community in different aggregate-size fractions of Mollisol soil samples. It was found that the chemical properties and pore characteristics of each soil aggregate fraction contributed to the performance of atrazine adsorption behavior and microbial community.
ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY
(2023)
Article
Ecology
Emily Lloret, Sylvie Quideau
Summary: The study aimed to assess the impact of vegetation shifts on soil microbial communities and carbon storage in boreal forests. Results suggest that a transition from spruce to aspen may lead to higher loss of litter through microbial respiration, but this may not affect its incorporation into the more persistent soil carbon pool.
FRONTIERS IN FORESTS AND GLOBAL CHANGE
(2021)
Article
Environmental Sciences
Sara Campana, Meggie Hudspith, David Lankes, Anna de Kluijver, Celine Demey, Jorien Schoorl, Samira Absalah, Marcel T. J. van der Meer, Benjamin Mueller, Jasper M. de Goeij
Summary: The study found differential processing of macroalgal and coral DOM by sponge species with high and low microbial abundance. Low microbial abundance sponges had higher assimilation rates and higher bioavailability of macroalgal DOM, releasing more inorganic nitrogen after feeding on it.
FRONTIERS IN MARINE SCIENCE
(2021)
Article
Soil Science
Lumei Xiao, Wei Zhang, Peilei Hu, Lars Vesterdal, Jie Zhao, Li Tang, Dan Xiao, Kelin Wang
Summary: The effects of mosses on belowground microbial community, soil properties, and soil carbon and nitrogen accumulation in subtropical areas during vegetation restoration are unclear.
SOIL BIOLOGY & BIOCHEMISTRY
(2023)
Article
Plant Sciences
Mukan Ji, Weidong Kong, Hongzeng Jia, Chen Ding, Alexandre M. Anesio, Yanfen Wang, Yong-Guan Zhu
Summary: This study used high-throughput sequencing to examine the characteristics of algal, bacterial, and fungal communities in red and green snow in the Antarctic Peninsula, revealing distinct features. The microbiome in red snow exhibited a more stable network and higher complexity compared to green snow, indicating a higher resistance to external disturbances.
Article
Ecology
Clydecia M. Spitzer, Maja K. Sundqvist, David A. Wardle, Michael J. Gundale, Paul Kardol
Summary: Elevational gradients have significant effects on the root traits of plants, but the responses vary among different traits and plant species. The coefficient of variation of root traits at the community level increases with elevation, and intraspecific variation plays a more important role. Intraspecific trait variation may drive plant community composition under global warming.
Article
Plant Sciences
Roger Grau-Andres, Paul Kardol, Michael J. Gundale
Summary: This study measured trait spectra in bryophytes and found trade-offs in carbon, nutrient, and water conservation strategies. The architectural traits of moss shoots and canopies formed a secondary axis of trait variation in contrast to vascular plants. Resource-conservative strategies dominated moss canopies in open and wet habitats.
JOURNAL OF ECOLOGY
(2022)
Article
Plant Sciences
Nicolas Fanin, Karina E. Clemmensen, Bjoern D. Lindahl, Mark Farrell, Marie-Charlotte Nilsson, Michael J. Gundale, Paul Kardol, David A. Wardle
Summary: The study found that the removal of ericaceous shrubs and associated ERI changed the composition of EMF communities, with larger effects occurring at earlier stages of the chronosequence. Removal of shrubs was associated with enhanced N availability, litter decomposition, and enrichment of the recalcitrant OM fraction. Increasing abundance of slow-growing ericaceous shrubs and the associated fungi contributes to increasing nutrient limitation, impaired decomposition, and progressive OM accumulation in boreal forests, particularly towards later successional stages.
Article
Multidisciplinary Sciences
Xue Gao, Sheng Wang, Yan-Fen Wang, Shuang Li, Shi-Xin Wu, Rong-Ge Yan, Yi-Wen Zhang, Rui-Dong Wan, Zhen He, Ren-De Song, Xin-Quan Zhao, Dong-Dong Wu, Qi-En Yang
Summary: In this study, we assembled two chromosome-level genomes for wild and domestic yaks, and identified structural variants (SVs) and differentially expressed genes related to high-altitude adaptation. Additionally, the construction of a single-cell gene expression atlas revealed a yak-specific endothelial cell subtype. These findings provide new insights into the genetic and cellular basis of yak adaptation to high-altitude environments and have important implications for understanding responses to hypoxia in large mammals and humans.
NATURE COMMUNICATIONS
(2022)
Article
Ecology
Evelin Iseli, Chelsea Chisholm, Jonathan Lenoir, Sylvia Haider, Tim Seipel, Agustina Barros, Anna L. Hargreaves, Paul Kardol, Jonas J. Lembrechts, Keith McDougall, Irfan Rashid, Sabine B. Rumpf, Jose Ramon Arevalo, Lohengrin Cavieres, Curtis Daehler, Pervaiz A. Dar, Bryan Endress, Gabi Jakobs, Alejandra Jimenez, Christoph Kueffer, Maritza Mihoc, Ann Milbau, John W. Morgan, Bridgett J. Naylor, Anibal Pauchard, Amanda Ratier Backes, Zafar A. Reshi, Lisa J. Rew, Damiano Righetti, James M. Shannon, Graciela Valencia, Neville Walsh, Genevieve T. Wright, Jake M. Alexander
Summary: High-elevation ecosystems are experiencing an increase in non-native plant species, with an average increase of approximately 16% per decade. The direction and magnitude of range limit shifts depend on elevation, and upward shifts are observed in at least seven regions. This highlights the need to monitor and prevent biosecurity issues in high-elevation ecosystems.
NATURE ECOLOGY & EVOLUTION
(2023)
Article
Ecology
Dongdong Duan, Zhen Tian, Nana Wu, Xiaoxuan Feng, Fujiang Hou, Zhibiao Nan, Paul Kardol, Tao Chen
Summary: Livestock grazing is a common land-use activity in grasslands that can affect plant communities directly or indirectly. This study investigated the effects of drought on grazing-induced soil legacy effects on plant biomass production and community composition. The results showed that drought can neutralize the positive effects of grazing on plant biomass and alleviate the negative effects on subordinate species.
FUNCTIONAL ECOLOGY
(2023)
Article
Biodiversity Conservation
Gijs M. Gerrits, Rik Waenink, Asa L. Aradottir, Elise Buisson, Thierry Dutoit, Maxmiller C. Ferreira, Joseph B. Fontaine, Renaud Jaunatre, Paul Kardol, Roos Loeb, Sandra Magro Ruiz, Mia Maltz, Meelis Paertel, Begona Peco, Julien Piqueray, Natasha A. L. Pilon, Ignacio Santa-Regina, Katharina T. Schmidt, Philip Sengl, Rudy van Diggelen, Daniel L. M. Vieira, Wolfgang von Brackel, Pawel Waryszak, Tim J. Wills, Rob H. Marrs, E. R. Jasper Wubs
Summary: Soil translocation is an effective restoration technique for terrestrial ecosystems, promoting the development of plant communities. However, the success of restoration is highly dependent on the restoration context, with greater success observed on loamy soils and when implemented over larger spatial areas.
JOURNAL OF APPLIED ECOLOGY
(2023)
Article
Biochemistry & Molecular Biology
Elle J. J. Bowd, Eleonora Egidi, David B. B. Lindenmayer, David A. A. Wardle, Paul Kardol, Claire Foster
Summary: Fire is a significant driver of biodiversity in forests and influences above-ground and below-ground communities. Our study used DNA sequencing to investigate the temporal responses of soil fungal communities to fire and found that the effects of fire on fungal communities are strongest in the short to medium term. Ectomycorrhizal fungi, which play important roles in forest ecosystems, were disproportionately impacted by fire compared to saprotrophs.
Article
Biology
Yuanhu Shao, Zuyan Wang, Tao Liu, Paul Kardol, Chengen Ma, Yonghong Hu, Yang Cui, Cancan Zhao, Weixin Zhang, Dali Guo, Shenglei Fu
Summary: In this study, nematode diversity in forest soils was found to be mainly influenced by soil organic carbon content, but climatic factors such as temperature, soil phosphorus content, soil pH, and precipitation also played significant roles. Furthermore, there were differences in nematode diversity between different climatic zones. Therefore, high-resolution studies are necessary to accurately predict the response of soil functions when climate conditions exceed the coping range of soil organisms.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
(2023)
Article
Multidisciplinary Sciences
Rui Yin, Wenkuan Qin, Xudong Wang, Dong Xie, Hao Wang, Hongyang Zhao, Zhenhua Zhang, Jin-Sheng He, Martin Schaedler, Paul Kardol, Nico Eisenhauer, Biao Zhu
Summary: Experimental soil warming in an alpine meadow on the Tibetan Plateau showed that it promoted plant growth, soil microbial respiration, and soil fauna feeding. However, it caused changes in their phenology, creating mismatches between organisms. This phenological asynchrony may have implications for ecosystem functioning and stability.
NATURE COMMUNICATIONS
(2023)
Article
Microbiology
Bala Singavarapu, Jianqing Du, Remy Beugnon, Simone Cesarz, Nico Eisenhauer, Kai Xue, Yanfen Wang, Helge Bruelheide, Tesfaye Wubet
Summary: Loss of multifunctional microbial communities can negatively affect ecosystem services, especially forest soil nutrient cycling. Therefore, exploration of the genomic potential of soil microbial communities, particularly their constituting subcommunities and taxa for nutrient cycling, is vital to get an in-depth mechanistic understanding for better management of forest soil ecosystems.
MICROBIOLOGY SPECTRUM
(2023)
Article
Ecology
Chuan Chen, Lingyan Li, Yanfen Wang, Xiuzhu Dong, Fang-Jie Zhao
Summary: Microorganisms are involved in the biogeochemical cycling of arsenic (As), transforming As between different forms and oxidation states. Methylation of As is enhanced by microbes in paddy soil, resulting in the formation of dimethylarsenic (DMAs), which can cause rice straighthead disease. In this study, we found that methanogenic archaea, particularly Methanomassiliicoccus, play a crucial role in demethylating pentavalent DMAs.
Article
Plant Sciences
Zhen Cheng, Jingxue Zhao, Luming Ding, Zhi-Hua Shi, Paul Kardol, Gao-Lin Wu
Summary: The findings of this study demonstrate that climate factors are more important than species richness for the provisioning of ecosystem functions at large spatial scales. In summary, this study underscores the importance of considering climate factors alongside species richness when assessing ecosystem functioning across extensive geographical areas.
JOURNAL OF ECOLOGY
(2023)
Article
Plant Sciences
Stefan F. Hupperts, Kazi Samiul Islam, Michael J. Gundale, Paul Kardol, Maja K. Sundqvist
Summary: The study found that climate warming affects the exchange of carbon and nitrogen between Ericaceous shrubs and root-associated fungi. The effects of warming on this exchange depend on the form of nitrogen. In the short term, warming decreases the amount of carbon allocated to root-associated fungi per unit of glycine assimilated by the shrubs, but increases it per unit of moss assimilated.