The RNA-seq approach to discriminate gene expression profiles in response to melatonin on cucumber lateral root formation

Melatonin promotes seminal root elongation and root growth in transgenic rice after germination

(2012) Sangkyu Park et al.   JOURNAL OF PINEAL RESEARCH

Melatonin regulates Arabidopsis root system architecture likely acting independently of auxin signaling

(2012) Ramón Pelagio-Flores et al.   JOURNAL OF PINEAL RESEARCH

An AM-induced,MYB-family gene ofLotus japonicus(LjMAMI) affects root growth in an AM-independent manner

(2012) Veronica Volpe et al.   PLANT JOURNAL

Melatonin enhances root regeneration, photosynthetic pigments, biomass, total carbohydrates and proline content in the cherry rootstock PHL-C (Prunus avium × Prunus cerasus)

(2012) Virginia Sarropoulou et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

RNA-Seq improves annotation of protein-coding genes in the cucumber genome

(2011) Zhen Li et al.   BMC GENOMICS

Melatonin promotes adventitious root regeneration in in vitro shoot tip explants of the commercial sweet cherry rootstocks CAB-6P (Prunus cerasus L.), Gisela 6 (P. cerasus × P. canescens), and MxM 60 (P. avium × P. mahaleb).

(2011) Virginia N. Sarropoulou et al.   JOURNAL OF PINEAL RESEARCH

Computational methods for transcriptome annotation and quantification using RNA-seq

(2011) Manuel Garber et al.   NATURE METHODS

Identification of differentially expressed genes between powdery mildew resistant near-isogenic line and susceptible line of cucumber by suppression subtractive hybridization

(2010) Xiaohua Qi et al.   SCIENTIA HORTICULTURAE

Gene expression analysis of the biocontrol fungus Trichoderma harzianum in the presence of tomato plants, chitin, or glucose using a high-density oligonucleotide microarray

(2009) Ilanit Samolski et al.   BMC MICROBIOLOGY

Lateral root emergence: a difficult birth

(2009) B. Peret et al.   JOURNAL OF EXPERIMENTAL BOTANY

Chemical stress by different agents affects the melatonin content of barley roots

(2009) Marino B. Arnao et al.   JOURNAL OF PINEAL RESEARCH

RNA-Seq—quantitative measurement of expression through massively parallel RNA-sequencing

(2009) Brian T. Wilhelm et al.   METHODS

The genome of the cucumber, Cucumis sativus L.

(2009) Sanwen Huang et al.   NATURE GENETICS

Arabidopsis lateral root development: an emerging story

(2009) Benjamin Péret et al.   TRENDS IN PLANT SCIENCE

Phytomelatonin: a review

(2008) Sergio D. Paredes et al.   JOURNAL OF EXPERIMENTAL BOTANY

Involvement of Pinus taeda MYB1 and MYB8 in phenylpropanoid metabolism and secondary cell wall biogenesis: a comparative in planta analysis

(2008) Claude Bomal et al.   JOURNAL OF EXPERIMENTAL BOTANY

Presowing seed treatment with melatonin protects red cabbage seedlings against toxic copper ion concentrations

(2008) Magorzata M. Posmyk et al.   JOURNAL OF PINEAL RESEARCH

Melatonin applied to cucumber (Cucumis sativusL.) seeds improves germination during chilling stress

(2008) Małgorzata M. Posmyk et al.   JOURNAL OF PINEAL RESEARCH

Exogenously applied melatonin stimulates root growth and raises endogenous indoleacetic acid in roots of etiolated seedlings of Brassica juncea

(2008) Qian Chen et al.   JOURNAL OF PLANT PHYSIOLOGY

Stem cell transcriptome profiling via massive-scale mRNA sequencing

(2008) Nicole Cloonan et al.   NATURE METHODS

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

Soybean WRKY-type transcription factor genes, GmWRKY13, GmWRKY21, and GmWRKY54, confer differential tolerance to abiotic stresses in transgenic Arabidopsis plants

(2008) Qi-Yun Zhou et al.   PLANT BIOTECHNOLOGY JOURNAL

Characterization of transcription factor gene SNAC2 conferring cold and salt tolerance in rice

(2008) Honghong Hu et al.   PLANT MOLECULAR BIOLOGY