Epigenetic resolution of the ‘curse of complexity’ in adaptive evolution of complex traits

Retraction Note to: Stimulus-triggered fate conversion of somatic cells into pluripotency

(2014) Haruko Obokata et al.   NATURE

Retraction Note to: Bidirectional developmental potential in reprogrammed cells with acquired pluripotency

(2014) Haruko Obokata et al.   NATURE

Mapping the Epigenetic Basis of Complex Traits

(2014) S. Cortijo et al.   SCIENCE

Gene loss, thermogenesis, and the origin of birds

(2013) Stuart A. Newman et al.   Annals of the New York Academy of Sciences

How epigenetic mutations can affect genetic evolution: Model and mechanism

(2013) Filippos D. Klironomos et al.   BIOESSAYS

GENETIC VARIATION AND THE EVOLUTION OF EPIGENETIC REGULATION

(2013) Robert E. Furrow et al.   EVOLUTION

Age-associated epigenetic drift: implications, and a case of epigenetic thrift?

(2013) A. E. Teschendorff et al.   HUMAN MOLECULAR GENETICS

"Homeostatic Hitchhiking": A Mechanism for the Evolutionary Retention of Complex Adaptations

(2013) A. V. Badyaev   INTEGRATIVE AND COMPARATIVE BIOLOGY

Deterministic direct reprogramming of somatic cells to pluripotency

(2013) Yoach Rais et al.   NATURE

Induction of mouse germ-cell fate by transcription factors in vitro

(2013) Fumio Nakaki et al.   NATURE

Derivation of novel human ground state naive pluripotent stem cells

(2013) Ohad Gafni et al.   NATURE

DNA methylation: roles in mammalian development

(2013) Zachary D. Smith et al.   NATURE REVIEWS GENETICS

Distinctive topology of age-associated epigenetic drift in the human interactome

(2013) J. West et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The adaptive invasion of epialleles in a heterogeneous environment

(2013) Jemma L. Geoghegan et al.   THEORETICAL POPULATION BIOLOGY

Environmental Dependence of Genetic Constraint

(2013) Marjon G. J. de Vos et al.   PLoS Genetics

Aging, Rejuvenation, and Epigenetic Reprogramming: Resetting the Aging Clock

(2012) Thomas A. Rando et al.   CELL

Epistasis as the primary factor in molecular evolution

(2012) Michael S. Breen et al.   NATURE

Architecture of the human regulatory network derived from ENCODE data

(2012) Mark B. Gerstein et al.   NATURE

New insights into establishment and maintenance of DNA methylation imprints in mammals

(2012) G. Kelsey et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Physico-Genetic Determinants in the Evolution of Development

(2012) S. A. Newman   SCIENCE

Exploring epiallele stability in a population-epigenetic model

(2012) Jemma L. Geoghegan et al.   THEORETICAL POPULATION BIOLOGY

A Unified Approach to the Evolutionary Consequences of Genetic and Nongenetic Inheritance

(2011) Troy Day et al.   AMERICAN NATURALIST

Thermogenesis, muscle hyperplasia, and the origin of birds

(2011) Stuart A. Newman   BIOESSAYS

Phenotypic plasticity can facilitate adaptive evolution in gene regulatory circuits

(2011) Carlos Espinosa-Soto et al.   BMC EVOLUTIONARY BIOLOGY

Parental ages and levels of DNA methylation in the newborn are correlated

(2011) Ronald M Adkins et al.   BMC Medical Genetics

Genome-Wide Epigenetic Perturbation Jump-Starts Patterns of Heritable Variation Found in Nature

(2011) Fabrice Roux et al.   GENETICS

Origin of the fittest: link between emergent variation and evolutionary change as a critical question in evolutionary biology

(2011) A. V. Badyaev   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

De novo DNA methylation: a germ cell perspective

(2011) Sébastien A. Smallwood et al.   TRENDS IN GENETICS

Epigenetic Contribution to Covariance Between Relatives

(2010) O. Tal et al.   GENETICS

The Rate of Establishment of Complex Adaptations

(2010) M. Lynch et al.   MOLECULAR BIOLOGY AND EVOLUTION

Mutational robustness can facilitate adaptation

(2010) Jeremy A. Draghi et al.   NATURE

Epigenetic memory in induced pluripotent stem cells

(2010) K. Kim et al.   NATURE

Scaling expectations for the time to establishment of complex adaptations

(2010) M. Lynch   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

EVOLUTION OF GENETIC INTEGRATION BETWEEN DISPERSAL AND COLONIZATION ABILITY IN A BIRD

(2009) Renée A. Duckworth et al.   EVOLUTION

Maternal effects and range expansion: a key factor in a dynamic process?

(2009) R. A Duckworth   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Parental effects in ecology and evolution: mechanisms, processes and implications

(2009) A. V Badyaev et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The universal distribution of evolutionary rates of genes and distinct characteristics of eukaryotic genes of different apparent ages

(2009) Y. I. Wolf et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Adaptive landscapes and protein evolution

(2009) M. Carneiro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Stochastic epigenetic variation as a driving force of development, evolutionary adaptation, and disease

(2009) A. P. Feinberg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cancer attractors: A systems view of tumors from a gene network dynamics and developmental perspective

(2009) Sui Huang et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Adaptive Dispersal Strategies and the Dynamics of a Range Expansion

(2008) Renée A. Duckworth   AMERICAN NATURALIST

Maternal Effects as Generators of Evolutionary Change

(2008) Alexander V. Badyaev   Annals of the New York Academy of Sciences

The brown adipocyte differentiation pathway in birds: An evolutionary road not taken

(2008) Nadejda V Mezentseva et al.   BMC BIOLOGY

Pleiotropic scaling of gene effects and the ‘cost of complexity’

(2008) Günter P. Wagner et al.   NATURE

Generation of pluripotent stem cells from adult human testis

(2008) Sabine Conrad et al.   NATURE