Transcriptomic Insights into the Life History of Bolidophytes, the Sister Lineage to Diatoms

An Inordinate Fondness? The Number, Distributions, and Origins of Diatom Species

(2013) David G. Mann et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Using Tablet for visual exploration of second-generation sequencing data

(2012) I. Milne et al.   BRIEFINGS IN BIOINFORMATICS

A revision of the genusCyclophoraand description ofAstrosynegen. nov. (Bacillariophyta), two genera with the pyrenoids contained within pseudosepta

(2012) Matt P. Ashworth et al.   PHYCOLOGIA

Gametogenesis and Auxospore Development in Actinocyclus (Bacillariophyta)

(2012) Masahiko Idei et al.   PLoS One

Untangling Genomes from Metagenomes: Revealing an Uncultured Class of Marine Euryarchaeota

(2012) V. Iverson et al.   SCIENCE

The model marine diatom Thalassiosira pseudonana likely descended from a freshwater ancestor in the genus Cyclotella

(2011) Andrew J Alverson et al.   BMC EVOLUTIONARY BIOLOGY

CHARACTERIZATION OF THE PARMALES: MUCH MORE THAN THE RESOLUTION OF A TAXONOMIC ENIGMA

(2011) Laure Guillou   JOURNAL OF PHYCOLOGY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Sequence-specific error profile of Illumina sequencers

(2011) Kensuke Nakamura et al.   NUCLEIC ACIDS RESEARCH

Supermatrix Data Highlight the Phylogenetic Relationships of Photosynthetic Stramenopiles

(2011) Eun Chan Yang et al.   PROTIST

High quality SNP calling using Illumina data at shallow coverage

(2010) N. Malhis et al.   BIOINFORMATICS

ISOLATION AND CHARACTERIZATION OF PARMALES (HETEROKONTA/HETEROKONTOPHYTA/STRAMENOPILES) FROM THE OYASHIO REGION, WESTERN NORTH PACIFIC1

(2010) Mutsuo Ichinomiya et al.   JOURNAL OF PHYCOLOGY

Unveiling the mysteries of phytoplankton life cycles: patterns and opportunities behind complexity

(2010) P. von Dassow et al.   JOURNAL OF PLANKTON RESEARCH

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Transcriptome analysis of functional differentiation between haploid and diploid cells of Emiliania huxleyi, a globally significant photosynthetic calcifying cell

(2009) Peter von Dassow et al.   GENOME BIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

In search of new tractable diatoms for experimental biology

(2008) Victor A. Chepurnov et al.   BIOESSAYS

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

(2008) J. C. Dohm et al.   NUCLEIC ACIDS RESEARCH